Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1288 100 3e-16 >seq1288 Length=1952040 Score = 100 bits (110), Expect = 3e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 164783 TTCATGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATA 164842 |||||||| |||||||||||||| | ||| | ||||| |||||||| ||| ||||||| Sbjct 617165 TTCATGATACAGTGGTTAATCAGCTTCTTGCAAAAATTGATGGTGTCGAACAATTAAATA 617224 Query 164843 ATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGAC 164902 | ||| | || | |||||||| || || ||| | || ||||| ||||| ||| ||| Sbjct 617225 ACATTCTTGTTATTGGTATGACTAATAGAAGAGATATGATCGATGAGGCTTTGTTAAGAC 617284 Query 164903 CTGGTCGATTAGA 164915 |||| |||| || Sbjct 617285 CTGGCAGATTGGA 617297 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/206 (71%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 164498 AATTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAA 164557 |||| || || || ||| |||||||||| || ||| |||| || |||||| || || | Sbjct 616756 AATTGGGTTGCAAGCATGTAAAAGGAATCTTGTTATATGGTCCACCTGGTACAGGAAAGA 616815 Query 164558 CATTAATGGCTCGATGCATTGCT-CAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTT 164613 | ||||||||||| || | | ||| | |||||| | || ||| |||||||| Sbjct 616816 CGTTAATGGCTCGGCAAATAGGTACAA--TGTTAAATGCAAGAGAACCG--AAAATTGTA 616871 Query 164614 AATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTG 164673 ||||| || || | ||| | |||||||| || || || |||||| | |||| ||| Sbjct 616872 AATGGCCCACAAATTTTGGATAAATATGTTGGAGAAAGCGAGGCTAATATCAGAAGATTG 616931 Query 164674 TTTCAGGAGGCTGAAGAAGAACAAAA 164699 || || || ||||||||| |||| Sbjct 616932 TTCGCTGAAGCAGAAGAAGAAGAAAA 616957 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595860454980000