Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq1238 242 2e-59 seq1181 138 8e-28 seq1467 136 3e-27 seq1060 125 5e-24 seq1525 107 1e-18 seq1163 104 2e-17 seq1153 102 5e-17 seq1521 98.7 7e-16 >seq1238 Length=3292682 Score = 242 bits (268), Expect = 2e-59 Identities = 326/452 (72%), Gaps = 4/452 (1%) Strand=Plus/Minus Query 6152 ATCGACCACGATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTA 6211 |||| ||| ||||||| | | ||||| ||||| ||||| || || || || || || Sbjct 3280764 ATCGGTCACCATGGGGAGCGTAAACGTCAATCGCAATGTCAGCGATGCTTTTTATCGTTA 3280705 Query 6212 CAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCAT 6271 || |||||||| ||| || ||||| || || || ||||| ||||||||||| || || Sbjct 3280704 TAAGATGCCGCGGATCCAGGCAAAGGTGGAAGGCAAAGGAAATGGTATTAAAACAGTGAT 3280645 Query 6272 TGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATA 6331 ||||||||| || || || |||||| |||| || ||||| || || ||||| || || Sbjct 3280644 CGTCAACATGGTGGATGTGGCGAAGGCGATCGGTCGTCCTGCTACATATCCGACCAAGTA 3280585 Query 6332 TTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGT 6391 |||||| ||||| | ||||||||||| |||||||| ||| ||||| ||||||||||| Sbjct 3280584 TTTCGGTTGCGAGTTGGGCGCTCAGACACAGTTTGACTTCAAGAACGAACGCTTCATCGT 3280525 Query 6392 TAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTT 6451 ||||| || || | | | ||| | || ||| | || || || || ||||| || | Sbjct 3280524 CAACGGCTCACACGATGCGACAAAGTTACAAGACCTGCTGGATGGTTTCATTCGAAAATA 3280465 Query 6452 TGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGAAA 6511 ||| || || | || |||||||| ||||| ||||| | || || | | |||| Sbjct 3280464 TGTTCTTTGCCCGGCCTGCGATAATCCGGAAACCGAATTAATGGTCAGTTCGAAGAAGGG 3280405 Query 6512 CACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCA--CAC 6569 ||| || || ||||| ||||| ||||| || |||||||| || || | || ||| Sbjct 3280404 CACGATTTCACAGGGTTGCAAGGCGTGTGGGCACCATGGCCTTCTTGA--GAGCAATCAC 3280347 Query 6570 AAACTCAACACCTTCATACTGAAGAATCCTCC 6601 || | ||||| | ||| |||| ||||| || Sbjct 3280346 AAGTTGAACACATACATCTTGAAAAATCCGCC 3280315 >seq1181 Length=949089 Score = 138 bits (152), Expect = 8e-28 Identities = 171/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | ||| | | |||||||| |||||| ||||||||||||||||||| Sbjct 811658 CATT-CCACCACGCAATCTGAGGACCAAATGGAGAGTGGATTCCTTTTGAATATTGTAAT 811716 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||||||| |||| | || || | || ||||| |||||||| | || || ||||| | Sbjct 811717 CAGACAAAGTACGTCCATCTTCCAGCTGCTTTCCAGCAAATATCAAACGCTGCTGATCAG 811776 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||||||||| ||| || ||| || || |||| || || || | | Sbjct 811777 GTGGGATGCCTTCTTTATCCTGGATCTTTGCTTTTACGTTCTCGATGGTGTCAGAAGCCT 811836 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||| | || || || || || ||||| || |||||||| ||||||||| Sbjct 811837 CAACTTCAAGAGTTATGGTCTTCCCGGTCAATGTCTTCACGAAAATCTGCATG 811889 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | ||| |||||||| | ||| ||||||||||||||||| |||| Sbjct 810748 TACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTTTGAATATTGTAGTCAG 810807 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | |||||| ||||| || || | | || || || | | Sbjct 810808 AAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTG 810867 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| ||||| |||||| |||||| || ||||||| || ||||||| |||| Sbjct 810868 GGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATAGTATCTGACGCCTCAA 810927 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || || || || || ||||| || || || || |||||||| Sbjct 810928 CTTCCAACGTGATGGTCTTTCCTGTCAATGTCTTGACAAAAATCTGCAT 810976 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | ||| |||||||| | ||| ||||| ||||||||||| |||| Sbjct 810292 TACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAG 810351 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | |||||| ||||| || || | | ||| || || | | Sbjct 810352 AAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTG 810411 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCA 38267 ||| ||||| |||||| |||||| || ||||||| || ||||| | || ||| Sbjct 810412 GGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATC-CGACGCTTCG 810470 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || || |||||||| || | ||||| || || || ||||| Sbjct 810471 ACTTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTTGCAT 810520 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || ||||| || |||||||| | ||| |||| || | ||||||||| ||||| Sbjct 811470 TCTTTCTGAATGTTATAATCAGAAAGCGTACGGCCGTCTTCAAGTTGTTTTCCAGCAAAG 811529 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 || | | || ||||| | ||||| ||||||||||| |||||| ||| ||||| Sbjct 811530 ATCAATCTCTGCTGATCTGGGGGGATTCCTTCTTTGTCTTGAATTTTGGCCTTGACATTT 811589 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | || || ||| |||||||| |||||||| || || || |||| |||||| || Sbjct 811590 TCGATCGTGTCTGATGCCTCAACTTCCAATGTAATGGTCTTTCCTGTCAGGGTTTTGACA 811649 Query 38307 AATATCTGCAT 38317 || |||||||| Sbjct 811650 AAGATCTGCAT 811660 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | ||| |||||||| | ||| ||||| ||||||||||| |||| Sbjct 810064 TACCACCGCGAAGTCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAG 810123 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | |||||| ||||| || || | | ||| || || | | Sbjct 810124 AAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTG 810183 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCA 38267 ||| ||||| |||||| |||||| || ||||||| || || || | || ||| Sbjct 810184 GGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTGTC-CGACGCTTCG 810242 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || || |||||||| || | ||||| || || || ||||| Sbjct 810243 ACTTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTTGCAT 810292 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | ||| |||||||| | ||| ||||| ||||||||||| |||| Sbjct 810520 TACCACCGCGAAGCCTCAAAACCAAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAG 810579 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| |||| || | |||||| ||||| || || | | || || || | | Sbjct 810580 AAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTG 810639 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCAC-TTTCA 38267 ||| ||||| |||||| |||||| || ||||||| || ||||| | || ||| Sbjct 810640 GGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGTATC-CGACGCTTCG 810698 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| || || || |||||||| || | ||||| || || || ||||| Sbjct 810699 ACTTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTTGCAT 810748 Score = 98.7 bits (108), Expect = 7e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | | ||| |||||||| | || ||||| |||||||| || |||| Sbjct 811204 TACCACCGCGAAGCCTCAATACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAG 811263 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | |||||||||||| || || | | || ||||| | || Sbjct 811264 AAAGTGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGGG 811323 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 ||| |||||||||| |||||| ||| ||||||| || ||| ||| |||| Sbjct 811324 GGATTCCTTCTTTGTATTGAATTTTGGCCTTGACATTCTCGATAGTGTCTGACGCCTCAA 811383 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||| || || || || || || |||| |||||| || || |||||||| Sbjct 811384 TTTCCAACGTGATGGTCTTTCCTGTCAGGGTTTTGACAAAAATCTGCAT 811432 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38127 TCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAAT 38186 || || |||||||| || || || ||| ||| | || |||| || || || || || Sbjct 809646 TCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCATCCTCTAGCTGCTTGCCCGCGAAA 809705 Query 38187 ATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTC 38246 ||||| | ||||||||||| || | ||||||||| || |||||| |||||| || Sbjct 809706 ATTAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATCTTGAATTTTCGCCTTCACGTTT 809765 Query 38247 TGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACG 38306 | | || ||| | ||| || || | |||||||||||||| || | ||||| || Sbjct 809766 TCAATCGTGTCTGAAGCTTCGACCTCCAGCGTAATAGTTTTACCAGTGAGAGTTTTGACA 809825 Query 38307 AATATCTGCAT 38317 || |||||||| Sbjct 809826 AAAATCTGCAT 809836 >seq1467 Length=10200 Score = 136 bits (150), Expect = 3e-27 Identities = 87/95 (92%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||| ||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 9778 AAGCCCATTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 9837 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 9838 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9872 >seq1060 Length=3336 Score = 125 bits (138), Expect = 5e-24 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1891 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGT 1950 Query 20007 GGTAATATTTAGCCTTA 20023 ||| |||||||||||| Sbjct 1951 GGTCGTATTTAGCCTTA 1967 >seq1525 Length=581956 Score = 107 bits (118), Expect = 1e-18 Identities = 81/95 (85%), Gaps = 9/95 (9%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 ||||||||||||||||| | |||||||||| ||||||||| || |||||||| Sbjct 522825 AAGCCCGTTCCCTTGGCGATAGTTTCGCTAG----TAGATAGGGACAGCGGGAATCTCGT 522880 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 522881 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 522915 >seq1163 Length=8263949 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| ||| || |||||||| ||||| | Sbjct 3692368 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGTGTGGATTCTTTTTGAATGTTGTAGT 3692426 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || | |||||| ||||| || || || || |||||||| | Sbjct 3692427 CGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCG 3692486 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||| ||| ||||| || || || | || ||| ||| | || Sbjct 3692487 GTGGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTT 3692546 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | |||||||||||||| || | ||||||||||| || ||||| Sbjct 3692547 CGACTTCGAGAGTAATAGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692598 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| ||| || || ||||| ||||| | Sbjct 3692824 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGT 3692882 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || |||||||| ||||| || || || || |||||||| | Sbjct 3692883 CGGAAAGAGTTCTGCCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCG 3692942 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || ||||||||| |||||| ||| || || | || || ||| | || Sbjct 3692943 GTGGAATTCCCTCTTTGTCCTGAATTTTAGCCTTTACGTTTTCGATGGTGTCTGAAGCTT 3693002 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| |||||||| || | ||||||||||| || ||||| Sbjct 3693003 CGACTTCGAGGGTAATGGTTTTACCAGTGAGAGTTTTCACGAAAATTTGCAT 3693054 Score = 100 bits (110), Expect = 2e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38103 CGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCG 38162 || || || || || || ||| || ||||| || ||||||||||| | | | | Sbjct 3691700 CGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGTTCTGCCA 3691759 Query 38163 TCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTG 38222 || || | |||||| ||||| || || || || |||||||| | || | || |||||| Sbjct 3691760 TCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCTTTG 3691819 Query 38223 TCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATA 38282 ||| |||||| ||| || || | || || ||| | ||| ||||| | ||||| Sbjct 3691820 TCCTGAATTTTGGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCGACTTCGAGGGTAATG 3691879 Query 38283 GTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||| || | ||||||||||| || ||||| Sbjct 3691880 GTTTTACCAGTGAGAGTTTTCACGAAAATTTGCAT 3691914 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| || || |||||||| ||||| | Sbjct 3691912 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGT 3691970 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || | |||||| ||||| || || || || |||||||| | Sbjct 3691971 CGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCG 3692030 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||| ||| ||||| || || || | || ||| ||| | || Sbjct 3692031 GTGGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTT 3692090 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| |||||||| || | ||||||||||| || ||||| Sbjct 3692091 CGACTTCGAGAGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692142 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| || || |||||||| ||||| | Sbjct 3692140 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGT 3692198 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || | |||||| ||||| || || || || |||||||| | Sbjct 3692199 CGGAAAGAGTTCTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCG 3692258 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||| ||| ||||| || || || | || ||| ||| | || Sbjct 3692259 GTGGAATTCCTTCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTT 3692318 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| |||||||| || | ||||||||||| || ||||| Sbjct 3692319 CGACTTCGAGAGTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692370 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/233 (69%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| ||| || || ||||| ||||||| Sbjct 3693052 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAAT 3693110 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || |||||||| ||||| || || || || |||||||| | Sbjct 3693111 CGGAAAGAGTTCTACCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCG 3693170 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || ||||||||| |||||| ||| || || | | || || || Sbjct 3693171 GTGGAATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTT 3693230 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 ||||||| | || || ||||||||||| | || || || || ||||||||| Sbjct 3693231 CAACTTCAAGGGTGATGGTTTTACCCGTAAGAGTCTTTACAAAGATCTGCATG 3693283 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| || |||| | ||||| |||| ||||| ||| || || ||||| ||||| | Sbjct 3692596 CATT-CCTCCTCGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGT 3692654 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | | | || || |||||||| ||||| || || || || |||||||| | Sbjct 3692655 CGGAAAGAGTTCTACCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCG 3692714 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | || ||||||||| |||||| ||| || || | | || || || Sbjct 3692715 GTGGAATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTT 3692774 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| | || || |||||||| || | ||||||||||| || ||||| Sbjct 3692775 CAACTTCAAGGGTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692826 >seq1153 Length=2037154 Score = 102 bits (112), Expect = 5e-17 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 38130 TTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATT 38189 ||||| || |||||||| |||||| ||| | || || | ||||| ||||| || || Sbjct 1923961 TTTTGGATGTTGTAATCGGACAAAGTGCGTCCATCCTCCAGCTGTTTGCCGGCGAAGATG 1924020 Query 38190 AGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGG 38249 || || |||||||| | || | || || |||||| || || ||| ||||||| | Sbjct 1924021 AGTCGCTGTTGATCTGGCGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCG 1924080 Query 38250 ACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAAT 38309 | ||||| || || || | ||||| ||||||||||| | |||||||||||| Sbjct 1924081 ATGGTATCAGAGGCCTCTACCTCGAGGGTAATGGTTTTACCCGTAAGGGTTTTCACGAAG 1924140 Query 38310 ATCTGCATG 38318 ||||||||| Sbjct 1924141 ATCTGCATG 1924149 >seq1521 Length=804780 Score = 98.7 bits (108), Expect = 7e-16 Identities = 71/81 (88%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 25909 TTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-GGTAATCTCGTTAATCCTTTCA 25967 |||||||||| |||||||||||||||||||| | | || |||||||||||||| |||| Sbjct 310639 TTCCCTTGGCAGTGGTTTCGCTAGATAGTAGGGACTGTGGGAATCTCGTTAATCCATTCA 310698 Query 25968 TGCGCGTCACTAATTAGATGA 25988 ||||| ||||||||||| ||| Sbjct 310699 TGCGCATCACTAATTAGGTGA 310719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334940872638050