Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq1181 152 2e-31 seq1163 147 9e-30 seq1169 136 2e-26 seq1540 129 2e-24 seq1533 98.7 4e-15 >seq1181 Length=949089 Score = 152 bits (168), Expect = 2e-31 Identities = 168/224 (75%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || ||||||||||||||||| || || || ||| | || Sbjct 809836 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAAGCTTCA 809777 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | || |||||||||||||| ||||| |||||||| |||||| Sbjct 809776 GACACGATTGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAA 809717 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | |||||||| | || || || || || |||||| | ||||| | || |||||| Sbjct 809716 CAAAGACTAATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAAT 809657 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 ||| | || || | ||||||||| | ||| | |||| ||||| Sbjct 809656 ATTCAGAAAGAATCTACACTTCACCTTGTACTTCGACTTAGAGG 809613 Score = 132 bits (146), Expect = 2e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| |||||||| || || |||||||| || ||| | || || ||| | || Sbjct 811204 ATGCAAATTTTTGTTAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 811145 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | ||| ||||||||||||||||||||||||||||| || || Sbjct 811144 GACACGATTGAGAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATTCCTCCGGACCAG 811085 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | ||||| ||| | || ||||||||||||||||| | || | | || |||||| Sbjct 811084 CAGAGGTTAATCTTCGCCGGAAAACAACTTGAAGATGGTCGCACACTTTCTGACTATAAT 811025 Query 391230 ATTGATAAGGA 391240 ||| | ||||| Sbjct 811024 ATTCAGAAGGA 811014 Score = 114 bits (126), Expect = 5e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || |||||||| || ||| | || || ||| | || Sbjct 810520 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810461 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| |||||||| || ||||||||||| || || || || Sbjct 810460 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810401 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | ||||||||||||||||| || | || | | || || ||| Sbjct 810400 CAAAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCGTACACTTTCTGACTACAAT 810341 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || ||||| Sbjct 810340 ATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGACT 810303 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || |||||||| || ||| | || || ||| | || Sbjct 810064 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810005 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| ||||||||||| ||||||||||| || || || ||| Sbjct 810004 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCGGACCAA 809945 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | ||||||||||||||||| || | || | | || |||||| Sbjct 809944 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCGTACACTTTCTGACTATAAT 809885 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | || || | ||| | || || || || || || Sbjct 809884 ATTCAGAAAGAATCCACATTGCATTTGGTTTTGAGGCT 809847 Score = 109 bits (120), Expect = 2e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || |||||||| || ||| | || || ||| | || Sbjct 810292 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810233 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | ||| |||||||| || ||||||||||| || || || || Sbjct 810232 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810173 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | ||||||||||||||||| || | || | | || || ||| Sbjct 810172 CAAAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCGTACACTTTCTGACTACAAT 810113 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || ||||| Sbjct 810112 ATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGACT 810075 Score = 105 bits (116), Expect = 3e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || ||||| || || |||||||| || ||| | || || ||| | || Sbjct 810748 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810689 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| |||||||| || ||||||||||| || || || || Sbjct 810688 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810629 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | ||||||||||||||||| || | || | | || || ||| Sbjct 810628 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCGTACACTTTCTGACTACAAT 810569 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || || || Sbjct 810568 ATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGGCT 810531 Score = 91.5 bits (100), Expect = 6e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || ||| |||| || || || || || | || ||||| | || Sbjct 810976 ATGCAGATTTTTGTCAAGACATTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 810917 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | ||| |||||||| || ||||||||||| || || || || Sbjct 810916 GATACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810857 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | || || ||| | ||||||||||||||||| || | || | | || || ||| Sbjct 810856 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCGTACACTTTCTGACTACAAT 810797 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 ||| | ||||| | ||| | || || || || || || Sbjct 810796 ATTCAAAAGGAATCCACATTGCATTTGGTTTTGAGGCT 810759 Score = 91.5 bits (100), Expect = 6e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || ||||| ||||| || || || ||||| | || ||||| |||| Sbjct 811661 AATGCAGATCTTTGTCAAAACCCTGACAGGAAAGACCATTACATTGGAAGTTGAGGCATC 811602 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | | || ||||||||||| || |||||||| || || ||||| Sbjct 811601 AGACACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCA 811542 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || || || | || |||||||||||||| || | || | | |||||||| Sbjct 811541 GCAGAGATTGATCTTTGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGATTATAA 811482 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 ||| | || || | ||| | || |||| Sbjct 811481 CATTCAGAAAGAATCCACATTGCATCTAGT 811452 Score = 89.7 bits (98), Expect = 2e-12 Identities = 151/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | ||||| || ||||| ||||| || || || || || | || |||| | || Sbjct 811433 AATGCAGATTTTTGTCAAAACCCTGACAGGAAAGACCATCACGTTGGAAATTGAGGCGTC 811374 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | || ||||||||| | || |||||||| || || ||||| Sbjct 811373 AGACACTATCGAGAATGTCAAGGCCAAAATTCAATACAAAGAAGGAATCCCCCCGGATCA 811314 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | || || ||| | || ||||||||||||||||| | || | | || ||||| Sbjct 811313 GCAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGTCGCACACTTTCTGACTATAA 811254 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 |||| | ||||| | || | || || ||||| || || Sbjct 811253 TATTCAGAAGGAATCTACCTTGCATTTGGTATTGAGGCT 811215 >seq1163 Length=8263949 Score = 147 bits (162), Expect = 9e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || ||||||||||| ||||| || || || ||| | || Sbjct 3691915 AATGCAAATTTTCGTGAAAACTCTCACTGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 3691856 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| ||| | || |||||||| || || || |||||||| || ||||| Sbjct 3691855 AGACACCATCGAAAACGTAAAGGCCAAAATTCAGGACAAAGAGGGAATTCCACCGGATCA 3691796 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | |||||| | || |||||||| |||||||| |||||| | | ||||| || Sbjct 3691795 ACAGCGTCTGATTTTCGCCGGCAAACAACTGGAAGATGGCAGAACTCTTTCTGATTACAA 3691736 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACT 391267 || | || || | ||||| |||||||| ||| |||| Sbjct 3691735 CATCCAAAAAGAATCCACACTCCACTTAGTTTTACGACT 3691697 Score = 140 bits (154), Expect = 1e-27 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || ||||||||||||||||| || || ||| | || Sbjct 3692599 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACTATTACTCTCGAAGTCGAAGCTTC 3692540 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| ||||| || ||||| ||||||||||| || ||||| Sbjct 3692539 AGACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCA 3692480 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | |||||| | || |||||||| |||||||| |||||| | | || || || Sbjct 3692479 ACAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAA 3692420 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | ||||||||| Sbjct 3692419 CATTCAAAAAGAATCCACACTTCAC 3692395 Score = 136 bits (150), Expect = 2e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || |||||||| |||||||| || || ||| | || Sbjct 3692143 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACTCTCGAAGTCGAAGCTTC 3692084 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| ||||| || ||||| ||||||||||| || ||||| Sbjct 3692083 AGACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCA 3692024 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | |||||| | || |||||||| |||||||| |||||| | | || || || Sbjct 3692023 ACAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAA 3691964 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | ||||||||| Sbjct 3691963 CATTCAAAAAGAATCTACACTTCAC 3691939 Score = 136 bits (150), Expect = 2e-26 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| ||||| || || |||||||| |||||||| || || ||| | || Sbjct 3692371 AATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACTCTCGAAGTCGAAGCTTC 3692312 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || ||| | ||| ||||| || ||||| ||||||||||| || ||||| Sbjct 3692311 AGACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCA 3692252 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | |||||| | || |||||||| |||||||| |||||| | | || || || Sbjct 3692251 ACAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAA 3692192 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | ||||||||| Sbjct 3692191 CATTCAAAAAGAATCTACACTTCAC 3692167 Score = 127 bits (140), Expect = 8e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || ||||||||||| ||||| || || || ||| | || Sbjct 3693055 AATGCAAATTTTCGTGAAAACTCTCACTGGTAAAACCATTACCCTCGAAGTCGAAGCTTC 3692996 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | ||| ||| | || |||||||| || || || |||||||| || ||||| Sbjct 3692995 AGACACCATCGAAAACGTAAAGGCTAAAATTCAGGACAAAGAGGGAATTCCACCGGATCA 3692936 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||| | |||||| | || |||||| | |||||||| |||||| | | || || || Sbjct 3692935 ACAGCGTCTGATTTTCGCCGGCAAACAATTGGAAGATGGCAGAACTCTTTCCGACTACAA 3692876 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 ||| | || || | || |||||| Sbjct 3692875 CATTCAGAAAGAATCCACGCTTCAC 3692851 Score = 123 bits (136), Expect = 1e-22 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || || || ||||| || ||||| ||||| || || ||||| || ||| | Sbjct 3693513 ATCATGCAAATCTTTGTAAAAACCCTCACTGGAAAAACCATCACCCTTGAGGTGGAAGCT 3693454 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||| | || ||| | | ||| || || |||||||| ||||| |||||||| ||| Sbjct 3693453 TCTGACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCAGAT 3693394 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||||||||| || || | || || ||||| || ||||| |||||| | | || || Sbjct 3693393 CAACAACGTTTGATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACTCTTTCTGACTAC 3693334 Query 391227 AATATTGATAAGGATGCAACACTTCA 391252 || ||| | ||||| | || ||||| Sbjct 3693333 AACATTCAGAAGGAATCTACGCTTCA 3693308 >seq1169 Length=4285202 Score = 136 bits (150), Expect = 2e-26 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || |||| |||||||| ||||| || | || | | ||||||| | |||| Sbjct 2103016 GTACTTATGAAAATGAAGGAAACTGCTGCGGCTTACTTAAATACTCCAGTAAAGAATGCT 2103075 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || || ||||| || || ||||| |||||| | ||||| |||||||| |||||||| || Sbjct 2103076 GTTATCACTGTACCAGCGTATTTTAATGATTCTCAACGACAAGCAACGAAAGATGCTGGT 2103135 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||||||| || ||||||||||| | ||||||||||| || |||||||| || || Sbjct 2103136 CAGATTGCTGGATTGAATGTTCTTCGTGTAATTAATGAACCAACCGCAGCTGCACTTGCT 2103195 Query 451445 TATGGACTAGGAAAATCAA-AAGA 451467 |||||| | ||| || ||| |||| Sbjct 2103196 TATGGAAT-GGATAAACAAGAAGA 2103218 >seq1540 Length=5613228 Score = 129 bits (142), Expect = 2e-24 Identities = 263/390 (67%), Gaps = 3/390 (1%) Strand=Plus/Minus Query 451216 TTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAA 451275 |||||| ||||| | || ||||| || || || | || |||||||| | || || Sbjct 2652098 TTATAAGGGTGAGATGAAGACTTTCTTCCCCGAGGAGGTGTCCTCTATGGTCTTGACGAA 2652039 Query 451276 AATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGT 451335 ||||| || || || || || | ||| | | || |||| || || ||||| Sbjct 2652038 GATGAAGGAGACGGCGGAGGCGTACCTGGGTAAAACTATAACAAATGCCGTCATCACTGT 2651979 Query 451336 TCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGG 451395 || |||||||||||||| | || | ||||| || || ||||| || ||||||||| Sbjct 2651978 GCCAGCTTATTTCAATGACTCTCAGAGACAAGCGACAAAGGATGCCGGCGCTATTGCTGG 2651919 Query 451396 TTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGG 451455 ||||| ||||| |||| || || || || ||||| ||||| |||||||||| || | Sbjct 2651918 CTTAAACGTTCTCAGAATAATAAACGAGCCCACAGCCGCTGCGATAGCATATGGTCTTGA 2651859 Query 451456 AAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCA 451515 || ||| | ||| ||||| ||| || | | ||||| || ||||| || || Sbjct 2651858 TAA---AAAGGCTGCAGGTGAAAAGAATGTTCTGATCTTTGACTTGGGTGGTGGTACCTT 2651802 Query 451516 TGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGA 451575 ||| || | || | || || ||||| | || ||||| || | || ||| || Sbjct 2651801 TGACGTGTCGATTCTGACGATCGAGGATGGTATCTTCGAAGTGAAATCCACGGCTGGCGA 2651742 Query 451576 TACTCATCTAGGAGGTGAAGATATTGATAA 451605 || ||||| || ||||| || ||||||| Sbjct 2651741 CACGCATCTTGGTGGTGAGGACTTTGATAA 2651712 Score = 86.0 bits (94), Expect = 2e-11 Identities = 242/367 (66%), Gaps = 6/367 (2%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTA-ACAGGTTC 452049 ||||| || || |||||||| |||||||| |||||||| || || ||||| || | | Sbjct 2651326 AATCCAGACGAGGCTGTTGCTTATGGTGCAGCAGTTCAGGCGGCCATTCTGCACGGCGAC 2651267 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | || ||| || | |||| | || | | || || || || |||| | || | Sbjct 2651266 AAATC-TGAGGAAGTCCAAGATCTACTTCTGCTGGACGTGACTCCGTTATCATTGGGTAT 2651208 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTT--CTATTCCTTGT 452167 ||| || ||||| || | ||||| | ||| ||||| ||||||| | || || Sbjct 2651207 TGAGACCGCTGGCGGCGTTATGACCACTTTGATTAA--GAGGAACACGACAATACCAACA 2651150 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 ||| ||| || || || | ||| ||||| |||||||| || || || || Sbjct 2651149 AAACAGACCCAGACGTTCACCACATACTCCGATAATCAACCAGGAGTGCTCATCCAGGTC 2651090 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | ||| ||||| | || ||||| ||||||||||| || || ||||| || | Sbjct 2651089 TATGAGGGAGAGAGAGCGATGACGAAAGATAATAATATCCTTGGCAAATTTGAGCTGACG 2651030 Query 452288 AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCA 452347 ||||||||| ||||| || ||| ||||| ||| | || | ||| | || || Sbjct 2651029 GGCATTCCTCCAGCACCAAGAGGTGTTCCGCAAATCGAAGTCACTTTCGATATCGACGCC 2650970 Query 452348 AATGGTA 452354 ||||||| Sbjct 2650969 AATGGTA 2650963 >seq1533 Length=2891333 Score = 98.7 bits (108), Expect = 4e-15 Identities = 281/429 (66%), Gaps = 5/429 (1%) Strand=Plus/Minus Query 451178 GTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACT 451237 ||| ||||| | | || ||||| | || |||||| | || ||||| || || || ||| Sbjct 1441890 GTAATAAATGATACTGGCAAGCCAAAGATCCAAGTACAGTACAAAGGAGAGACGAAGACT 1441831 Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAA-TGAAAGAAACAGCAGAACA 451296 || || |||||| | || ||||| |||| ||||| |||| || || ||||| Sbjct 1441830 TTCTTCCCCGAAGAAGTGAGTTCGATGGT-CTTAGTAAAAATGAAGGAGACTGCAGAGGC 1441772 Query 451297 ATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGC 451356 ||| | || | || || | || || || || || |||||||| ||||| || | Sbjct 1441771 ATACTTAGGCAAGACTGTCACCAACGCTGTGATCACCGTCCCCGCTTACTTCAACGACTC 1441712 Query 451357 ACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || || || ||||| || || || || || | || |||||||| | || ||||| Sbjct 1441711 GCAGCGTCAGGCAACCAAGGACGCTGGTACCATCTCGGGCTTAAATGTATTGCGTATTAT 1441652 Query 451417 TAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGa 451476 || || || || || || || | |||||||| || | || |||| || | || Sbjct 1441651 CAACGAGCCCACCGCCGCCGCAATTGCATATGGTCTCGACAAG---AAAGCCACCGGCGA 1441595 Query 451477 aaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT 451536 ||| | | | |||||| | ||||| || ||| || || | || | || Sbjct 1441594 GCGAAACGTCCTTATCTTTGATCTCGGTGGTGGCACTTTCGACGTGTCCATCCTGACTAT 1441535 Query 451537 TGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 ||||||||| | || || || ||| | || || ||||||||| | || ||||| || Sbjct 1441534 TGAAGATGGTATCTTCGAGGTCAAGTCCACGGCGGGAGATACTCATTTGGGTGGTGAGGA 1441475 Query 451597 TATTGATAA 451605 ||||||| Sbjct 1441474 CTTTGATAA 1441466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975679163467400