Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1540 212 5e-49 seq1169 154 1e-31 seq1163 140 3e-27 seq1181 134 1e-25 seq1154 93.3 3e-13 >seq1540 Length=5613228 Score = 212 bits (234), Expect = 5e-49 Identities = 526/784 (67%), Gaps = 22/784 (3%) Strand=Plus/Minus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTA 551856 ||||||||||| || || |||||||| || |||| | ||| |||| |||| || | Sbjct 2651737 CATCTTGGTGGTGAGGACTTTGATAACCGAATGGTGAACCATTTTGTGC--AAGAATTCA 2651680 Query 551857 AACGAAAAAACAAAGTTGATCT-ATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACT 551915 || | ||| |||| ||||| | | | | | |||||| | ||| |||| ||| Sbjct 2651679 AAAGGAAATACAAGAAAGATCTGAGCAGTAACAAG-AGAGCTCTGAGACGTTTAAGGACT 2651621 Query 551916 GCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGT--ACTCAAACCACTATTGAAGTAG 551973 |||||||| ||||| || ||| | || | || || || || | | ||||| | | Sbjct 2651620 GCTTGCGAGAGAGCAAA--GAGAACGTTGAGCTCGTCGACGCAGGCGAGCATTGAGATTG 2651563 Query 551974 ATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATA 552033 ||||||| |||||||| ||||| | |||| | | | || |||| ||| || || Sbjct 2651562 ATTCATTGTTTGAGGGGATTGACTTCTATACATCGGTCACTAGAGCCAGATTCGAGGAGC 2651503 Query 552034 TTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAA 552093 | || ||||||| ||||||| || | ||||| || ||| | | | | |||||| | | Sbjct 2651502 TCTGCGCTGATCTGTTTAGAAGCACTCTCGAACCCGTGGAAAAGGCTCTTAGAGATGCCA 2651443 Query 552094 AGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTA 552153 |||| |||||| | |||| || || || || || ||||| || || ||||| || | Sbjct 2651442 AGATGGATAAAGCTCAAGTTCACAGCATCGTTCTAGTCGGTGGTTCCACTAGAATACCAA 2651383 Query 552154 AAATTCGCGAAATG---TTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 |||||| ||| | | ||| | || ||| || || || || | || || ||| Sbjct 2651382 AAATTCA-GAAGTTACTTCAAGAT-TTCTTT-AACGGCAAGGAACTGAACAAATCCATTA 2651326 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGG--ACA 552268 ||||||| ||||||||||| |||||||| ||| |||| || || ||||| || ||| Sbjct 2651325 ATCCAGACGAGGCTGTTGCTTATGGTGCAGCAGTTCAGGCGGCCATTCTGCACGGCGACA 2651266 Query 552269 AA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 || |||| ||| | ||| || | | || | || || ||||| |||| | ||| Sbjct 2651265 AATCTGAGGAAG---TCCAAGATCTACTTCTGCTGGACGTGACTCCGTTATCATTGGGTA 2651209 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | || || | ||| || ||||||| | | | || | || || || || || || | Sbjct 2651208 TTGAGACCGCTGGCGGCGTTATGACCACTTTGATTAAGAGGAACACGACAATACCAACAA 2651149 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 || | | | || | || || || ||||||||| | | || || || | | Sbjct 2651148 AACAGACCCAGACGTTCACCACATACTCCGATAATCAACCAGGAGTGCTCATCCAGGTCT 2651089 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 ||| ||||| ||| | || |||||||||||| ||||| | ||| | | | Sbjct 2651088 ATGAGGGAGAGAGAGCGATGACGAAAGATAATAATATCCTTGGCAAATTTGAGCTGACGG 2651029 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 | |||||||| || || | || || |||||||| ||||| |||||||||||||| |||| Sbjct 2651028 GCATTCCTCCAGCACCAAGAGGTGTTCCGCAAATCGAAGTCACTTTCGATATCGACGCCA 2650969 Query 552568 ATGG 552571 |||| Sbjct 2650968 ATGG 2650965 >seq1169 Length=4285202 Score = 154 bits (170), Expect = 1e-31 Identities = 124/150 (83%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 550390 AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTAC 550449 ||| | | |||| || || ||||||||||| ||||||||||| || ||||| ||||| || Sbjct 2103063 AGTAAAGAATGCTGTTATCACTGTACCAGCGTATTTTAATGATTCTCAACGACAAGCAAC 2103122 Query 550450 TAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGC 550509 ||||||||||| | ||||||||| | |||||||||||| | || |||||||| || || Sbjct 2103123 GAAAGATGCTGGTCAGATTGCTGGATTGAATGTTCTTCGTGTAATTAATGAACCAACCGC 2103182 Query 550510 TGCTGCACTTGCATATGGACTTGATAAACA 550539 ||||||||||| |||||| | |||||||| Sbjct 2103183 AGCTGCACTTGCTTATGGAATGGATAAACA 2103212 Score = 91.5 bits (100), Expect = 1e-12 Identities = 176/260 (68%), Gaps = 0/260 (0%) Strand=Plus/Plus Query 552324 GGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||| | |||||| |||| ||| | | || | | ||| | | ||||| ||||| ||| Sbjct 2104307 GGTATTGAAACACTTGGTGGTGTATTTACGAGATTGATCTCTCGTAATACAACTATACCT 2104366 Query 552384 TGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAA 552443 || ||| || |||||||||||| | ||| |||||| || ||| || Sbjct 2104367 ACAAAGAAAAGTCAGGTATTTTCTACGGCAGCGGATGGTCAAACACAAGTCGAGATTAAA 2104426 Query 552444 ATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTA 552503 || | |||| || || || | ||| ||||| || | || || |||| | | Sbjct 2104427 GTTCATCAAGGCGAGCGAGAAATGGCTAGTGATAACAAGCTTCTAGGACAATTTAGTCTT 2104486 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 | |||||||| ||||| || | || ||||| ||||| ||||| || |||||||||||| Sbjct 2104487 GTTGGTATTCCACCTGCACCAAGGGGTGTACCACAAATAGAAGTAACATTCGATATCGAT 2104546 Query 552564 GCCAATGGAATTTTGAATGT 552583 || ||||| ||| || |||| Sbjct 2104547 GCAAATGGTATTGTGCATGT 2104566 >seq1163 Length=8263949 Score = 140 bits (154), Expect = 3e-27 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| ||| |||||| ||| ||||| || | |||||||| Sbjct 3691925 AGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTTCTG 3691984 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| ||||| ||||| || | || ||||| || |||||||||||| Sbjct 3691985 CCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCTTCT 3692044 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 ||||| || ||||| |||||| || || || || | | || ||||||||| Sbjct 3692045 TTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGAC-TTCGAGAGT 3692103 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||||| || |||||||| ||||| |||||||| Sbjct 3692104 AATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692142 Score = 140 bits (154), Expect = 3e-27 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| ||| |||||| ||| ||||| || | |||||||| Sbjct 3692153 AGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTTCTG 3692212 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| ||||| ||||| || | || ||||| || |||||||||||| Sbjct 3692213 CCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCTTCT 3692272 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 ||||| || ||||| |||||| || || || || | | || ||||||||| Sbjct 3692273 TTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGAC-TTCGAGAGT 3692331 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || |||||||| || |||||||| ||||| |||||||| Sbjct 3692332 AATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692370 Score = 140 bits (154), Expect = 3e-27 Identities = 164/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| || |||||| ||| ||||| || | |||||||| Sbjct 3692381 AGACGCAGAACCAGGTGAAGTGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTTCTG 3692440 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| ||||| ||||| || | || ||||| || |||||||||||| Sbjct 3692441 CCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCTTCT 3692500 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGT 563435 ||||| || ||||| |||||| || || || || | | || ||||||||| Sbjct 3692501 TTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGAC-TTCGAGAGT 3692559 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||||||| || |||||||| ||||| |||||||| Sbjct 3692560 AATAGTTTTACCGGTGAGAGTTTTCACGAAGATTTGCAT 3692598 Score = 127 bits (140), Expect = 2e-23 Identities = 161/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || || ||||| || |||||| ||| ||||| || | |||||||| Sbjct 3692837 AGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTTCTG 3692896 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| | |||||| ||||| ||||| || | || ||||| || |||||||| ||| Sbjct 3692897 CCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCCTCT 3692956 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || || |||||||| ||||| || || || || | | | | |||||| || Sbjct 3692957 TTGTCCTGAATTTTAGCCTTTACGTTTTCGATGGTGTCTGAA-GCTTCGACTTCGAGGGT 3693015 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||||||||| |||||||| |||||||||||||| Sbjct 3693016 AATGGTTTTACCAGTGAGAGTTTTCACGAAAATTTGCAT 3693054 Score = 125 bits (138), Expect = 6e-23 Identities = 144/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| || |||||||||| |||||||| |||||| |||||||| ||||| ||||| Sbjct 3691728 TTTGG--ATGTTGTAATCAGAAAGAGTTCTGCCATCTTCCAGTTGTTTGCCGGCGAAAAT 3691785 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTC 563405 || | || ||||| || |||||||| ||||| || |||||||| ||||| || Sbjct 3691786 CAGACGCTGTTGATCCGGTGGAATTCCCTCTTTGTCCTGAATTTTGGCCTTTACGTTTTC 3691845 Query 563406 AATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGA 563464 || || || | | | | |||||| |||| ||||||||||| |||||||| |||| Sbjct 3691846 GATGGTGTCTGAA-GCTTCGACTTCGAGGGTAATGGTTTTACCAGTGAGAGTTTTCACGA 3691904 Query 563465 AAATTTGCAT 563474 |||||||||| Sbjct 3691905 AAATTTGCAT 3691914 Score = 118 bits (130), Expect = 9e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || ||||||||||| ||| ||| || ||| ||||| |||| |||||||| Sbjct 3693293 AGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGTTCTG 3693352 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||| || ||||| ||||| ||||| || | | ||| ||||| |||||||| |||||| Sbjct 3693353 CCATCCTCTAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACCTTCT 3693412 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 |||||||| || || ||| || || || || |||| | | || || || || Sbjct 3693413 TTATCTTGGATCTTAGCTTTGACATTTTCGATAGTGTCAG-AAGCTTCCACCTCAAGGGT 3693471 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | ||||| ||||| || ||||| || || |||||||| Sbjct 3693472 GATGGTTTTTCCAGTGAGGGTTTTTACAAAGATTTGCAT 3693510 >seq1181 Length=949089 Score = 134 bits (148), Expect = 1e-25 Identities = 165/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || |||||||| ||||| ||| |||||| |||||| || || | || ||| Sbjct 809616 CTAAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCGGATAAAGTC 809675 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||| || || || || || || ||||| |||||||| ||||| |||||||| ||| Sbjct 809676 CGTCCATCCTCTAGCTGCTTGCCCGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCT 809735 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAG 563432 ||||||||||||||||| || || ||||| || || | | || || || Sbjct 809736 TCTTTATCTTGAATTTTCGCCTTCACGTTTTCAATCGTGTCTGAAGCTTCGAC-CTCCAG 809794 Query 563433 AGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||| |||||||||||| |||||||| || ||||| |||||| Sbjct 809795 CGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTGCATA 809837 Score = 134 bits (148), Expect = 1e-25 Identities = 162/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 563259 ACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGA 563318 |||||| || | ||| | |||| ||| || |||||| || |||| || || | Sbjct 810989 ACGGAGAACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGACC 811048 Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 ||||||||||||||||||||| || || | || ||||| || |||||||||||||| || Sbjct 811049 ATCTTCAAGTTGTTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGAGGAATTCCTTCCTT 811108 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAA 563437 |||||||||||| ||| || |||||| || || | | || ||| | ||| | Sbjct 811109 ATCTTGAATTTTGGCTTTGACATTCTCAATCGTGTCCGACGCTTCGAC-TTCCAAAGTGA 811167 Query 563438 CAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 |||||||| ||||| |||||||| |||||||||||| Sbjct 811168 TTGTTTTACCGGTAAGCGTTTTAACAAAAATTTGCATA 811205 Score = 102 bits (112), Expect = 7e-16 Identities = 135/185 (73%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || || | |||||||||||||| ||||| || || | || Sbjct 810338 AATATTGTAGTCAGAAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCT 810397 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| || || || |||||||| || || |||||||| ||| || ||| || || Sbjct 810398 TTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGT 810457 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||| | | || ||| | ||| | |||||||| ||||| ||||| || ||||||| Sbjct 810458 ATCCGACGCTTCGAC-TTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTT 810516 Query 563471 GCATA 563475 ||||| Sbjct 810517 GCATA 810521 Score = 102 bits (112), Expect = 7e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || ||||| | || |||||| ||| || ||||||| || || | Sbjct 811443 AGACGGAGGACTAGATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAAAGCGTACGG 811502 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 ||||||||||||||||| ||||| || | ||| |||||||| || || ||||||||| Sbjct 811503 CCGTCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCTTCT 811562 Query 563377 TTATCTTGAATTTT 563390 || ||||||||||| Sbjct 811563 TTGTCTTGAATTTT 811576 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || || | |||||||||||||| ||||| || || | || Sbjct 810110 AATATTGTAGTCAGAAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCT 810169 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 |||||| || || || |||||||| || || |||||||| ||| || ||| || || Sbjct 810170 TTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGT 810229 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 || | | || ||| | ||| | |||||||| ||||| ||||| || ||||||| Sbjct 810230 GTCCGACGCTTCGAC-TTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTT 810288 Query 563471 GCATA 563475 ||||| Sbjct 810289 GCATA 810293 Score = 96.9 bits (106), Expect = 3e-14 Identities = 134/185 (72%), Gaps = 2/185 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 ||||||||| |||| || || | |||||||||||||| ||||| || || | || Sbjct 810566 AATATTGTAGTCAGAAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAAGATCAACCT 810625 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||||| || || || |||||||| || || |||||||| ||| || ||| || || Sbjct 810626 CTGCTGGTCCGGTGGGATTCCTTCCTTGTCCTGAATTTTGGCTTTGACATTCTCGATCGT 810685 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||| | | || ||| | ||| | |||||||| ||||| ||||| || ||||||| Sbjct 810686 ATCCGACGCTTCGAC-TTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGACAAAAATTT 810744 Query 563471 GCATA 563475 ||||| Sbjct 810745 GCATA 810749 Score = 93.3 bits (102), Expect = 3e-13 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 ||| | ||| | |||| ||| || |||||| || |||| || || | |||||| Sbjct 811223 TACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAGAAAGTGTGCGACCATCTTC 811282 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 ||||||||||||||| || || | ||| |||||||| || || ||||||||||| | ||| Sbjct 811283 AAGTTGTTTTCCGGCGAAGATCAATCTCTGCTGATCCGGGGGGATTCCTTCTTTGTATTG 811342 Query 563385 AATTTT 563390 |||||| Sbjct 811343 AATTTT 811348 Score = 93.3 bits (102), Expect = 3e-13 Identities = 137/193 (71%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAA 563341 || |||| | |||||||||||||| | ||| | | |||||| || || ||||| |||| Sbjct 811697 TTCCTTTTG-AATATTGTAATCAGACAAAGTACGTCCATCTTCCAGCTGCTTTCCAGCAA 811755 Query 563342 AAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTG 563401 | || | | ||||||||||| || || ||||||||||| || || ||| |||||| Sbjct 811756 ATATCAAACGCTGCTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTTGCTTTTACGT 811815 Query 563402 CCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||| || || |||| | ||| ||||| | || || || || | || || | Sbjct 811816 TCTCGATGGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTTCCCGGTCAATGTCTTCA 811875 Query 563462 CGAAAATTTGCAT 563474 ||||||| ||||| Sbjct 811876 CGAAAATCTGCAT 811888 Score = 91.5 bits (100), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 563283 TTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAA 563342 |||||| |||||| || |||| || || | |||||||||||||| ||||| || Sbjct 809873 TTCTTTCTGAATATTATAGTCAGAAAGTGTACGACCGTCTTCAAGTTGTTTCCCGGCGAA 809932 Query 563343 AATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGC 563402 || | || || || || || || |||||||| || ||||||||||| ||| || Sbjct 809933 GATCAACCTCTGTTGGTCCGGTGGGATTCCTTCCTTGTCTTGAATTTTGGCTTTGACATT 809992 Query 563403 CTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAA 563461 ||| || || || | | || ||| | ||| | |||||||| ||||| ||||| | Sbjct 809993 CTCGATCGTGTCCGACGCTTCGAC-TTCCAAAGTGATTGTTTTACCGGTAAGCGTTTTGA 810051 Query 563462 CGAAAATTTGCATA 563475 | |||||||||||| Sbjct 810052 CAAAAATTTGCATA 810065 >seq1154 Length=2236959 Score = 93.3 bits (102), Expect = 3e-13 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 930666 GATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATT 930725 ||||||||| || || |||||||| ||||||||| ||||||| || | ||||| || Sbjct 524187 GATTTTTCTAGTCCTAACATTGCCAAGGAAATGCATGTTGGACACTTAAGGTCTACAATA 524246 Query 930726 ATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCATCGAGTCAAT 930785 || ||||| | | | ||||| | ||||| | ||| | | || || | ||| Sbjct 524247 ATCGGAGATAGTATCTCAAGATTGTTAGAATACTTAGGACATGACGTGTTGAGACTTAAT 524306 Query 930786 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 930826 ||| | ||||| ||||| ||||||||||||||||| || || Sbjct 524307 CATGTAGGTGACTGGGGCACACAATTTGGTATGTTGATAGC 524347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029214029009500