Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1238 102 1e-16 >seq1238 Length=3292682 Score = 102 bits (112), Expect = 1e-16 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 37428 TTTTCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATA 37487 ||||||| ||| | |||||||| ||||| || ||| |||||| ||||| |||||| Sbjct 3273225 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGAATA 3273284 Query 37488 TTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTA 37547 ||||| || || || ||||| ||||| ||||| | ||||| || | || || || | Sbjct 3273285 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGAAATTTTCACTTCTTGG 3273344 Query 37548 AAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGA 37607 || |||| | || || |||||||| || ||||| ||| ||||| || || | | Sbjct 3273345 CTGAATCTCTCAATTAGATTCTCATTAACGATACCATCGGAAGCGGCAAAAAATGCTAAA 3273404 Query 37608 ACATATTTTATAAAATGTCTTTCATC 37633 |||| |||||| || | ||||| Sbjct 3273405 ACATGAGAGATAAAACGTTTCTCATC 3273430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592305323862000