Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1540 199 3e-45 seq1163 156 3e-32 seq1533 140 2e-27 seq1169 140 2e-27 seq1181 123 2e-22 seq1154 109 4e-18 seq1252 87.8 1e-11 seq1170 86.0 4e-11 >seq1540 Length=5613228 Score = 199 bits (220), Expect = 3e-45 Identities = 551/831 (66%), Gaps = 24/831 (3%) Strand=Plus/Minus Query 475338 TCGAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAG 475397 |||| |||||| | ||| || | | | || ||||| || | |||||||||||||| | Sbjct 2651781 TCGAGGATGGTATCTTCGAAGTGAAATCCACGGCTGGCGACACGCATCTTGGTGGTGAGG 2651722 Query 475398 ATTTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAA---AATAA 475452 | |||||||| || | || | ||| |||| |||| ||||| |||||| || || Sbjct 2651721 ACTTTGATAACCGAATGGTGAACCATTTTGTGC--AAGAATTCAAAAGGAAATACAAGAA 2651664 Query 475453 AGTT--GATCTTTCAACATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGT 475510 || | || | | |||| | ||| | |||||| | || |||||||| || | Sbjct 2651663 AGATCTGAGCAGT-AACAAGAG----AGCTCTGAGACGTTTAAGGACTGCTTGCGAGAGA 2651609 Query 475511 GCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAA 475570 || ||| || | | || | || || | | |||| ||||||| | ||||| Sbjct 2651608 GCAAAGAGAACGTTGAGCTCGTCGACGCAGGCGAGCATTGAGATTGATTCATTGTTTGAG 2651549 Query 475571 GGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTC 475630 || ||||| | |||| | || || || | ||| || || | || ||||||| Sbjct 2651548 GGGATTGACTTCTATACATCGGTCACTAGAGCCAGATTCGAGGAGCTCTGCGCTGATCTG 2651489 Query 475631 TTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCA 475690 ||||||| || | |||||||| ||| | | ||| |||||| | || | || ||| | Sbjct 2651488 TTTAGAAGCACTCTCGAACCCGTGGAAAAGGCTCTTAGAGATGCCAAGATGGATAAAGCT 2651429 Query 475691 CAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATG 475750 ||||| || || ||||| || || ||||| || ||||| |||||||| |||| | Sbjct 2651428 CAAGTTCACAGCATCGTTCTAGTCGGTGGTTCCACTAGAATACCAAAAATTC-AGAAGTT 2651370 Query 475751 CTTTCATCATAT-TTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGT 475809 |||| || | ||||| || || | | || || | ||||| || || ||||| Sbjct 2651369 ACTTCAAGATTTCTTTAACGGCAAGGAACTGAACAAATCCATTAATCCAGACGAGGCTGT 2651310 Query 475810 TGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGAC-GAGAAACTAA 475868 ||| ||||| || || || || || || ||| | || | | | | | ||| || | Sbjct 2651309 TGCTTATGGTGCAGCAGTTCAGGCGGCCATTCTG-CACGGCGACAAATCTGAGGAAGTCC 2651251 Query 475869 ATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGA 475928 | || | | || | ||||| ||||| | ||||| ||| |||| || | ||| || Sbjct 2651250 AAGATCTACTTCTGCTGGACGTGACTCCGTTATCATTGGGTATTGAGACCGCTGGCGGCG 2651191 Query 475929 TTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAAT---CAAAAGTAT 475985 ||||||| | | | ||| | || || || | || ||| ||||| | || | || Sbjct 2651190 TTATGACCACTTTGATTAAGAGGAACACGACAATACCAA-CAAAACAGACCCAGACGT-- 2651134 Query 475986 TTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAA 476045 | |||| || || ||||||||| || || |||||| ||| ||| || || ||| Sbjct 2651133 TCACCACATACTCCGATAATCAACCAGGAGTGCTCATCCAGGTCTATGAGGGAGAGAGAG 2651074 Query 476046 AATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTC 476105 | || ||||||||||| | ||||| | ||| | || || |||||||| || | Sbjct 2651073 CGATGACGAAAGATAATAATATCCTTGGCAAATTTGAGCTGACGGGCATTCCTCCAGCAC 2651014 Query 476106 CCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTA 476156 | ||||| ||||| ||||| ||||| ||||| ||||| || || ||||||| Sbjct 2651013 CAAGAGGTGTTCCGCAAATCGAAGTCACTTTCGATATCGACGCCAATGGTA 2650963 Score = 102 bits (112), Expect = 5e-16 Identities = 271/409 (66%), Gaps = 9/409 (2%) Strand=Plus/Minus Query 474518 GATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGT 474577 ||||| || | ||||| |||||| ||| |||||| | || || || || ||| Sbjct 2652211 GATGCAAAGCGTTTGATCGGTCGTCGTTTCGATGATGCGACGGTGCAGAGCGACATGAAA 2652152 Query 474578 CATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAA--TACACG 474635 || ||||| || | |||| | |||| ||| || |||||| | || ||| || | | Sbjct 2652151 CACTGGCCATTCACGGTGGTCAATGATGGCGGCAAACCAAAAATCAAAGTGTCTTATAAG 2652092 Query 474636 CAGGTGAAACTAA-ACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATG 474694 ||||| | || || | ||| ||| | | | || || ||||| || | || ||| Sbjct 2652091 --GGTGAGATGAAGACTTTCTTCCCCG-AGGAGGTGTCCTCTATGGTCTTGACGAAGATG 2652035 Query 474695 AAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCA 474754 || | || ||| | || || || || |||| |||| || || ||||| ||| Sbjct 2652034 AAGGAGACGGCGGAGGCGTACCTGGGTAAAACTATAACAAATGCCGTCATCACTGTGCCA 2651975 Query 474755 GCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTT 474814 || ||||| ||||| ||||| | ||||| || || ||||| || ||||| || | Sbjct 2651974 GCTTATTTCAATGACTCTCAGAGACAAGCGACAAAGGATGCCGGCGCTATTGCTGGCTTA 2651915 Query 474815 AATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAG 474874 || ||| | | || || || || || ||||| || || | || |||||||||||||| Sbjct 2651914 AACGTTCTCAGAATAATAAACGAGCCCACAGCCGCTGCGATAGCATATGGTCTTGATAAA 2651855 Query 474875 AATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATT---GTGGAGGTA 474920 || ||| ||| |||||| | |||||||| | |||| |||| Sbjct 2651854 AAGGCTGCAGGTGAAAAGAATGTTCTGATCTTTGACTTGGGTGGTGGTA 2651806 >seq1163 Length=8263949 Score = 156 bits (172), Expect = 3e-32 Identities = 166/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||||||||| || ||||||||||| ||| ||| || || || || |||| ||||| Sbjct 3693289 ACGAAGACGCAGAACAAGATGAAGCGTAGATTCCTTCTGAATGTTGTAGTCAGAAAGAGT 3693348 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| ||| || ||||||||||||||||| || | |||||||||||| |||||||| || Sbjct 3693349 TCTGCCATCCTCTAGTTGCTTTCCAGCAAAGATCAAACGTTGTTGATCTGGAGGAATACC 3693408 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 ||| || ||||| ||||| ||||||| ||| ||||| |||| | ||||| Sbjct 3693409 TTCTTTATCTTGGATCTTAGCTTTGACATTTTCGATAGTGTCAGAAGCTTCCACCTCAAG 3693468 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || ||||| || || || || ||||| Sbjct 3693469 GGTGATGGTTTTTCCAGTGAGGGTTTTTACAAAGATTTG 3693507 Score = 136 bits (150), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || ||||||||| |||||| || || || || | |||||| Sbjct 3691922 CGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTT 3691981 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| ||||| || || || ||||| ||||| |||||||| || ||||||||| Sbjct 3691982 CTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCT 3692041 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || || || || || || ||| || ||| ||||| || | | ||| || Sbjct 3692042 TCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGACTTCGAGA 3692101 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||||||||||||||| || ||||| ||||| Sbjct 3692102 GTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3692139 Score = 136 bits (150), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || ||||||||| |||||| || || || || | |||||| Sbjct 3692150 CGAAGACGCAGAACCAGGTGAAGTGTAGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTT 3692209 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| ||||| || || || ||||| ||||| |||||||| || ||||||||| Sbjct 3692210 CTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCT 3692269 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || || || || || || ||| || ||| ||||| || | | ||| || Sbjct 3692270 TCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGACTTCGAGA 3692329 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| ||||||||||||||||| || ||||| ||||| Sbjct 3692330 GTAATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3692367 Score = 136 bits (150), Expect = 3e-26 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || |||||||| |||||| || || || || | |||||| Sbjct 3692378 CGAAGACGCAGAACCAGGTGAAGTGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGAGTT 3692437 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| ||||| || || || ||||| ||||| |||||||| || ||||||||| Sbjct 3692438 CTGCCATCTTCCAGTTGTTTACCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCT 3692497 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || || || || || || ||| || ||| ||||| || | | ||| || Sbjct 3692498 TCTTTATCCTGGATTTTGGCTTTTACGTTTTCGATAGTGTCTGAAGCTTCGACTTCGAGA 3692557 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||||||||||||||||||||| || ||||| ||||| Sbjct 3692558 GTAATAGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3692595 Score = 132 bits (146), Expect = 3e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || ||||| || |||||| || || || || | |||||| Sbjct 3692606 CGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTT 3692665 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 || |||||| | ||| || || || ||||| ||||| |||||||| || |||||||| Sbjct 3692666 CTACCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCC 3692725 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| ||||| || || || ||| || || |||| | | | ||||||| Sbjct 3692726 TCTTTGTCCTGAATTTTGGCCTTTACGTTTTCTATTGTGTCAGAGGCTTCAACTTCAAGG 3692785 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||||||||||||||| || ||||| ||||| Sbjct 3692786 GTGATGGTTTTACCGGTGAGAGTTTTCACGAAGATTTG 3692823 Score = 123 bits (136), Expect = 2e-22 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || || || ||||| || |||||| || || || || | |||||| Sbjct 3692834 CGAAGACGCAGAACCAGGTGAAGCGTGGATTCTTTCTGAATGTTGTAGTCGGAAAGAGTT 3692893 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| |||||| | ||| || || || ||||| ||||| |||||||| || |||||||| Sbjct 3692894 CTGCCATCTTCCAATTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCCC 3692953 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 || ||||| ||||| || || || ||| || || || | | ||| ||| Sbjct 3692954 TCTTTGTCCTGAATTTTAGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCGACTTCGAGG 3693013 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| |||||||| |||||||| || ||||||||||| Sbjct 3693014 GTAATGGTTTTACCAGTGAGAGTTTTCACGAAAATTTG 3693051 Score = 120 bits (132), Expect = 2e-21 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 |||||| || | || | || ||||| |||||| | || ||||||| ||||| Sbjct 3691693 ACGAAGTCGTAAAACTAAGTGGAGTGTGGATTCTTTTTGGATGTTGTAATCAGAAAGAGT 3691752 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 |||| |||||| ||||| || || || ||||| ||||| |||||||| || |||||||| Sbjct 3691753 TCTGCCATCTTCCAGTTGTTTGCCGGCGAAAATCAGACGCTGTTGATCCGGTGGAATTCC 3691812 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 || ||||| ||||| || || || ||| || || || | | ||| || Sbjct 3691813 CTCTTTGTCCTGAATTTTGGCCTTTACGTTTTCGATGGTGTCTGAAGCTTCGACTTCGAG 3691872 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||| |||||||| |||||||| || ||||||||||| Sbjct 3691873 GGTAATGGTTTTACCAGTGAGAGTTTTCACGAAAATTTG 3691911 >seq1533 Length=2891333 Score = 140 bits (154), Expect = 2e-27 Identities = 575/892 (64%), Gaps = 26/892 (3%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||||||| | ||| || | | || || |||||| | ||| | |||||||| || Sbjct 1441533 GAAGATGGTATCTTCGAGGTCAAGTCCACGGCGGGAGATACTCATTTGGGTGGTGAGGAC 1441474 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 |||||||| | | || |||| | || | || |||||| | ||| | || | Sbjct 1441473 TTTGATAACCGCATGGTCAATCAC--TTCGTACAGGAATTCAAGCGTAAATACAAGAAGG 1441416 Query 475458 ATCTTTCAACATCTGCTAAA---GCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTA 475514 || | || || |||| ||| | | |||||| | || || || |||||||| | Sbjct 1441415 ATTTG---ACTTCGAATAAACGCGCACTTCGTCGTCTTCGCACAGCCTGCGAACGTGCCA 1441359 Query 475515 AGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAA 475574 |||| | || || || | || || | | | || | ||||| | | ||| |||| Sbjct 1441358 AGCGCACCCTGTCATCCTCCACCCAGGCCAGCATCGAGATCGATTCGTTGTATGAGGGAA 1441299 Query 475575 TTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTA 475634 |||||| | || || || | ||| || || || | || | |||||||| Sbjct 1441298 TTGATTTCTACACCTCCATCACCCGAGCTCGTTTCGAGGAACTCTGCGCCGATCTCTTCC 1441239 Query 475635 GAAAAACAATTGAACCCGTTGAACAAGTT-CTCAGAGATTCTAAACTTGACAAATCACAA 475693 | || |||||||||||||| |||| || | || | || | |||||| | ||| Sbjct 1441238 GTGGTACTCTTGAACCCGTTGAA-AAGTCGCTGCGCGACGCCAAGATGGACAAAGCTCAA 1441180 Query 475694 GTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTT 475753 |||| || || ||| | || ||||| || || ||||||| ||||| |||| | | Sbjct 1441179 ATCCACGATATCGTTTTAGTCGGAGGCTCTACGCGAATTCCCAAAATTC-AGAAGCTCCT 1441121 Query 475754 TCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGC 475812 || | |||| ||||| ||| || | || || | | ||||||||||| ||||| || Sbjct 1441120 GCAAGACTTTTTCAATGGCAAAGAGCTCAACAAATCTATCAATCCTGATGAGGCTGTGGC 1441061 Query 475813 ATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGG---TCAATCAGACGAGAAACTAAA 475869 ||| || || || || || || ||||| || || | ||||||| ||| | | | Sbjct 1441060 ATACGGCGCGGCAGTACAGGCGGCTATCTTGCACGGTGATAAATCAGAGGAGGTGCAAGA 1441001 Query 475870 TAATATTGTACTTG-TTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGA 475928 ||| ||| | || || ||||| || || ||||| |||| || | || || Sbjct 1441000 ----CTTGCTTTTGCTCGATGTCACTCCGCTCTCTCTAGGTATTGAGACTGCCGGTGGTG 1440945 Query 475929 TTATGACTAATCTTATTGACAGAAATACTCCTATCCC-ATGCA-AAAAATCAAAAGTATT 475986 | ||||| |||||| | || ||||| | ||||| | | | | | ||||| || Sbjct 1440944 TCATGACCGCGCTTATTAAGAGGAATACCACCATCCCGACGAAGCAGACTCAAA--CCTT 1440887 Query 475987 TTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAA 476046 | | ||||| | || |||||| | || || || | | || ||||| | Sbjct 1440886 TACAACTTACGCCGACAATCAACCCGGCGTGTTGATTCAGGTATACGAGGGTGAGCGCGC 1440827 Query 476047 ATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCC 476106 | || || |||||||| ||| || | || | ||| |||||||| || || || Sbjct 1440826 CATGACCAAGGATAATAATTTACTGGGCAAATTCGAGCTTAGCGGTATTCCACCAGCACC 1440767 Query 476107 CAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 | ||||||||||| ||||| || || || ||||| ||||| || |||||||| ||||| Sbjct 1440766 TCGTGGAGTTCCTCAGATTGAGGTGACGTTCGATATCGATGCGAACGGTATTCTCAATGT 1440707 Query 476167 TACTGCTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTACAAAC 476218 | || || || |||| | |||| || || || |||||||| ||| Sbjct 1440706 CTCCGCCGTGGACAAGTCTACTGGCAAGGAGAACAAGATCACTATTACCAAC 1440655 >seq1169 Length=4285202 Score = 140 bits (154), Expect = 2e-27 Identities = 119/147 (81%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||||| |||| || || ||||| ||||| |||||||||||||||||||| |||||||| Sbjct 2103063 AGTAAAGAATGCTGTTATCACTGTACCAGCGTATTTTAATGATTCTCAACGACAAGCAAC 2103122 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 |||||||| || ||||| || | |||||| | ||| | |||||||||||||| || Sbjct 2103123 GAAAGATGCTGGTCAGATTGCTGGATTGAATGTTCTTCGTGTAATTAATGAACCAACCGC 2103182 Query 474847 AGCCGCACTTGCTTATGGTCTTGATAA 474873 ||| |||||||||||||| | ||||| Sbjct 2103183 AGCTGCACTTGCTTATGGAATGGATAA 2103209 >seq1181 Length=949089 Score = 123 bits (136), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 12/222 (5%) Strand=Plus/Plus Query 480554 AAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 ||| || |||||||| ||||||||| |||||| || |||||| || | || ||| | Sbjct 809618 AAGTCGAAGTACAAGGTGAAGTGTAGATTCTTTCTGAATATTATAGTCGGATAAAGTCCG 809677 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 ||| || || ||||| || || ||||| || | ||||||||| |||||||| ||||| Sbjct 809678 TCCATCCTCTAGCTGCTTGCCCGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCTTC 809737 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA---- 480729 || |||||||| || || || |||||| || || ||||| ||| | Sbjct 809738 TTTATCTTGAATTTTCGCCTTCACGTTTTCAATCGTGTC------TGAAGCTTCGACCTC 809791 Query 480730 --GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||||||||| |||||||| || || ||||| || Sbjct 809792 CAGCGTAATAGTTTTACCAGTGAGAGTTTTGACAAAAATCTG 809833 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| | |||||| || | ||| | ||| ||| || || |||||| |||| || || Sbjct 810983 ACGTAAACGGAGAACCAAATGCAAGGTAGATTCCTTCTGAATATTATAGTCAGAAAGTGT 811042 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||||||||| ||||| || || || | | || || || ||||||||||| Sbjct 811043 GCGACCATCTTCAAGTTGTTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGAGGAATTCC 811102 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||| |||||||| || ||||||| ||||| || || | | | | || ||| Sbjct 811103 TTCCTTATCTTGAATTTTGGCTTTGACATTCTCAATCGTGTCCGACGCTTCGACTTCCAA 811162 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||||||||||| || || ||||| |||||||| Sbjct 811163 -AGTGATTGTTTTACCGGTAAGCGTTTTAACAAAAATTTG 811201 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| |||||||| || ||||| | ||| |||||| || |||||||||| || || Sbjct 811439 ACGTAGACGGAGGACTAGATGCAATGTGGATTCTTTCTGAATGTTATAATCAGAAAGCGT 811498 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | ||||||||||| ||||||||||| || | | || ||||| || || ||||| Sbjct 811499 ACGGCCGTCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCC 811558 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||| ||||||||||| || |||||| ||| || || || | || | || || ||| Sbjct 811559 TTCTTTGTCTTGAATTTTGGCCTTGACATTTTCGATCGTGTCTGATGCCTCAACTTCCAA 811618 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || || || || || || || || || Sbjct 811619 -TGTAATGGTCTTTCCTGTCAGGGTTTTGACAAAGATCTG 811657 Score = 91.5 bits (100), Expect = 1e-12 Identities = 137/191 (72%), Gaps = 3/191 (2%) Strand=Plus/Plus Query 480580 TTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAA 480639 || |||| ||| ||| ||||||| | ||| | |||||| || ||||||||||||| Sbjct 811697 TTCCTTTTGAAT-ATTGTAATCAGACAAAGTACGTCCATCTTCCAGCTGCTTTCCAGCAA 811755 Query 480640 AAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAG 480699 | || | ||| || |||||||| || || ||||| || || || |||||| ||| || Sbjct 811756 ATATCAAACGCTGCTGATCAGGTGGGATGCCTTCTTTATCCTGGATCTTTGCTTTTACGT 811815 Query 480700 CTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTA 480758 || || || |||| | | || |||||| || || || || ||||| | ||||| Sbjct 811816 TCTCGATGGTGTCAGAAGCCTCAA-CTTCAAGAGTTATGGTCTTCCCGGTCAATGTCTTC 811874 Query 480759 ACGAAAATTTG 480769 |||||||| || Sbjct 811875 ACGAAAATCTG 811885 >seq1154 Length=2236959 Score = 109 bits (120), Expect = 4e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 817098 TAGATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAA 817157 |||||||||| ||| || ||||| |||||||||||| |||||||||| || ||||||| Sbjct 524185 TAGATTTTTCTAGTCCTAACATTGCCAAGGAAATGCATGTTGGACACTTAAGGTCTACAA 524244 Query 817158 TAATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAA 817217 |||| || || | | | ||| | | |||| | ||| ||| || ||| | | Sbjct 524245 TAATCGGAGATAGTATCTCAAGATTGTTAGAATACTTAGGACATGACGTGTTGAGACTTA 524304 Query 817218 ATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGC 817260 ||||| | ||||| ||||| ||||||||||||||||| || || Sbjct 524305 ATCATGTAGGTGACTGGGGCACACAATTTGGTATGTTGATAGC 524347 >seq1252 Length=1638539 Score = 87.8 bits (96), Expect = 1e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 296074 ATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATTTTATGGAA 296133 || ||| | |||||||| || | ||||| || ||||| ||| || | | |||||| Sbjct 482495 ATGGGACGGTGGATTGACTTTGAAAATGACTACAAAACCATGTATCCATGGTATATGGAG 482436 Query 296134 TCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATGATTTTTGAAGGTTATAAA 296193 || | ||| || || || || ||| | || | | || | ||||||| |||| Sbjct 482435 TCCATCTGGTGGGTGTTCAAGCAGCTATATCACAAAGGCCTTATATATGAAGGTATTAAA 482376 Query 296194 GTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGCAAAACAAAAT 296253 || |||||||||||||||| || || || ||| | || | ||||||||| || ||| Sbjct 482375 GTAATGCCTTATTCTACTGCCTGTAACACGCCACTGTCCAACTTTGAGGCAGGTCAGAAT 482316 Query 296254 TATAAAGAGATTATTGATCCATCTGT 296279 || || || || || |||||||| || Sbjct 482315 TACAAGGATATAATGGATCCATCGGT 482290 >seq1170 Length=7610050 Score = 86.0 bits (94), Expect = 4e-11 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 592481 TTAATTACGCCTATATTAATCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATG 592540 |||||| ||||| || ||||||||||| | ||| | ||||||||| | |||| Sbjct 7501620 TTAATTGTGCCTAAATGCTGATGATTTGATTTATAATTACAATGATCTTTAAAAACTATG 7501561 Query 592541 TATGGTACACCTGTTTCAATTTGTGTTTCCATTATTTTAAACCATAAATCTCTTGCTTTG 592600 ||||| || ||||||||| |||| | | || || || |||||| || |||||||| Sbjct 7501560 TATGGCACTCCTGTTTCACATTGTATCTGAATAATGAGAAGCCATAACTCCCTTGCTTTA 7501501 Query 592601 ATTTGTTTTATAAATCTACCCTCATTTTCATATTTAA 592637 | |||| || ||| | || || | ||||||| ||| Sbjct 7501500 ACTTGTCTTCGAAAACGTCCTTCTTGTTCATATCTAA 7501464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268112712979400