Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1288 125 8e-24 >seq1288 Length=1952040 Score = 125 bits (138), Expect = 8e-24 Identities = 171/239 (72%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||||||||| | ||||| || ||||| || || ||||| ||||| || |||||| Sbjct 1344222 ACTCCAATAGGACCCATACCAGGTCCGCCACCCCCGTGAGGAATGCAGAACGTTTTATGT 1344163 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | || || ||||| |||| ||| | ||| || || ||| Sbjct 1344162 AGATTGAGATGTGACACGTCGCTGCCATAATCACCAGGTCGACACAAACCAACTTGAGCA 1344103 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | |||||| ||||||||| || || || || || ||||| Sbjct 1344102 TTCATATTGGCACCGTCCAAATATACTTGACCACCAGCGTTGTGCACCATGTTGCATATA 1344043 Query 138363 TGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGA 138421 | | || || ||| ||||| |||| ||||||||||| || ||||| | ||| || Sbjct 1344042 TCATTAATCGTTTCTTCGAATACTCCATTCGTCGATGGATACGTGATCATCAGACACGA 1343984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578987181906000