Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1163 176 4e-39 seq1181 136 4e-27 seq1153 129 5e-25 seq1492 118 1e-21 seq1394 93.3 4e-14 >seq1163 Length=8263949 Score = 176 bits (194), Expect = 4e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || ||||||||||||||||| |||||||| ||||| | Sbjct 3692598 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACTATTACTCTCGAAGTCGAAGCTTCA 3692539 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| || ||||| || ||||||||||| || || |||||| Sbjct 3692538 GACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCAA 3692479 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| ||||| ||||| ||| |||| | || || || ||| Sbjct 3692478 CAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAAC 3692419 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| ||| |||| |||| | || ||||| Sbjct 3692418 ATTCAAAAAGAATCCACACTTCACCTGGTTCTGCGTCTTCGAGGAGG 3692372 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || ||||||||||| ||||| |||||||| ||||| | Sbjct 3692142 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACTCTCGAAGTCGAAGCTTCA 3692083 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| || ||||| || ||||||||||| || || |||||| Sbjct 3692082 GACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCAA 3692023 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| ||||| ||||| ||| |||| | || || || ||| Sbjct 3692022 CAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAAC 3691963 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| ||| |||| |||| | || ||||| Sbjct 3691962 ATTCAAAAAGAATCTACACTTCACCTGGTTCTGCGTCTTCGAGGAGG 3691916 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || ||||||||||| ||||| |||||||| ||||| | Sbjct 3692370 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATTACTCTCGAAGTCGAAGCTTCA 3692311 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| |||||| || ||||| || ||||||||||| || || |||||| Sbjct 3692310 GACACTATCGAAAACGTAAAAGCCAAAATCCAGGATAAAGAAGGAATTCCACCGGATCAA 3692251 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| ||||| ||||| ||| |||| | || || || ||| Sbjct 3692250 CAGCGTCTGATTTTCGCCGGTAAACAACTGGAAGATGGCAGAACTCTTTCCGACTACAAC 3692191 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| ||||| ||| |||| |||| | || ||||| Sbjct 3692190 ATTCAAAAAGAATCTACACTTCACCTGGTTCTGCGTCTTCGAGGAGG 3692144 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || |||||||| || || || ||||| |||||| | Sbjct 3693282 ATGCAGATCTTTGTAAAGACTCTTACGGGTAAAACCATCACCCTTGAAGTTGAAGCCTCT 3693223 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||||| ||||| || || || |||||||| ||||| || || |||||| Sbjct 3693222 GACACAATAGAAAACGTAAAGGCCAAAATTCAGGACAAAGAGGGAATTCCACCGGATCAA 3693163 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| ||||| |||| ||| |||| | || ||||| ||| Sbjct 3693162 CAGCGTCTGATTTTCGCCGGCAAACAATTGGAAGATGGTAGAACTCTTTCCGATTACAAC 3693103 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || ||| |||| |||| | || ||||| Sbjct 3693102 ATTCAGAAAGAATCCACGCTTCACCTGGTTCTGCGTCTTCGAGGAGG 3693056 Score = 154 bits (170), Expect = 1e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | ||||| || || || ||||| || || || || || ||||| | Sbjct 3693510 ATGCAAATCTTTGTAAAAACCCTCACTGGAAAAACCATCACCCTTGAGGTGGAAGCTTCT 3693451 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| ||||||||||| |||||||| || ||||| |||||| Sbjct 3693450 GACACTATCGAAAATGTCAAAGCTAAGATCCAAGATAAAGAAGGTATTCCTCCAGATCAA 3693391 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||||||||| || || || || |||||| |||| | || || || ||| Sbjct 3693390 CAACGTTTGATCTTTGCTGGAAAGCAACTAGAGGATGGCAGAACTCTTTCTGACTACAAC 3693331 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| |||||||| || || || | || |||| | || |||||| Sbjct 3693330 ATTCAGAAGGAATCTACGCTTCATCTTGTTCTGCGTCTTCGTGGAGGC 3693283 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| || ||||||||||| || || || ||||| |||||| | Sbjct 3692826 ATGCAAATCTTCGTGAAAACTCTCACCGGTAAAACCATCACCCTTGAAGTTGAAGCCTCT 3692767 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| |||||| ||||| || || || |||||||| ||||| || || |||||| Sbjct 3692766 GACACAATAGAAAACGTAAAGGCCAAAATTCAGGACAAAGAGGGAATTCCACCGGATCAA 3692707 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| |||| || ||||| ||||| |||| ||| |||| | || || || ||| Sbjct 3692706 CAGCGTCTGATTTTCGCCGGCAAACAATTGGAAGATGGTAGAACTCTTTCCGACTACAAC 3692647 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || ||||| || || ||| |||| |||| | || ||||| Sbjct 3692646 ATTCAGAAAGAATCCACGCTTCACCTGGTTCTGCGTCTTCGAGGAGG 3692600 >seq1181 Length=949089 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | || || | ||||| || || || || || ||||| || || Sbjct 811891 ACCATGCAGATTTTCGTGAAGACATTGACCGGGAAGACCATAACTCTTGAAGTTGAGGCT 811832 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | |||||| ||||||||| || |||||||| || || || ||| Sbjct 811831 TCTGACACCATCGAGAACGTAAAAGCAAAGATCCAGGATAAAGAAGGCATCCCACCTGAT 811772 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || |||||||| ||||| || || |||||||| ||| | | |||| ||||| Sbjct 811771 CAGCAGCGTTTGATATTTGCTGGAAAGCAGCTGGAAGATGGACGTACTTTGTCTGATTAC 811712 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || |||||||||||||| || || || ||||| | ||||||| || || Sbjct 811711 AATATTCAAAAGGAATCCACTCTCCATTTGGTCCTCAGATTGCGTGGTGG 811662 Score = 129 bits (142), Expect = 5e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || ||||||||||||||||| || || ||||| | Sbjct 809836 ATGCAGATTTTTGTCAAAACTCTCACTGGTAAAACTATTACGCTGGAGGTCGAAGCTTCA 809777 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || || ||||| |||||||| || |||||||||||| Sbjct 809776 GACACGATTGAAAACGTGAAGGCGAAAATTCAAGATAAAGAAGGCATTCCTCCCGATCAA 809717 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | | || || || || || ||||| |||||| | | | || || ||||| Sbjct 809716 CAAAGACTAATTTTCGCGGGCAAGCAGCTAGAGGATGGACGGACTTTATCCGACTATAAT 809657 Query 24884 ATTCAAAAGGAATCGACACTACAC 24907 ||||| || ||||| ||||| ||| Sbjct 809656 ATTCAGAAAGAATCTACACTTCAC 809633 Score = 129 bits (142), Expect = 5e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | |||||||| ||||||||||| || || | ||||| ||||| | Sbjct 810064 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810005 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || || |||||||| |||||||| || || || ||| Sbjct 810004 GACACGATCGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGAATCCCACCGGACCAA 809945 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || | |||||||| ||||||||||| || || || ||| | || | || || |||| Sbjct 809944 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCG-TACAC-TTTCTGACTATA 809887 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| || ||||| ||| | || ||||| ||| | | ||||| || Sbjct 809886 ATATTCAGAAAGAATCCACATTGCATTTGGTTTTGAGGCTTCGCGGCGG 809838 Score = 129 bits (142), Expect = 5e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | |||||||| ||||||||||| || || | ||||| ||||| | Sbjct 810292 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810233 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || || || ||||| |||||||| || || || || Sbjct 810232 GACACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810173 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||| | |||||||| ||||||||||| || || || ||| | || | || || || | Sbjct 810172 CAAAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCG-TACAC-TTTCTGACTACA 810115 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| |||||||| ||| | || ||||| ||| || | ||||| || Sbjct 810114 ATATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGACTTCGCGGTGG 810066 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | |||||||| ||||||||||| || || | ||||| ||||| | Sbjct 810520 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810461 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || || ||||| |||||||| || || || || Sbjct 810460 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810401 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 ||| | |||||||| ||||||||||| || || || ||| | || | || || || | Sbjct 810400 CAAAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCG-TACAC-TTTCTGACTACA 810343 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| |||||||| ||| | || ||||| ||| || | ||||| || Sbjct 810342 ATATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGACTTCGCGGTGG 810294 Score = 120 bits (132), Expect = 3e-22 Identities = 166/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||||||||| ||||||||||| || || | ||||| ||||| | Sbjct 811204 ATGCAAATTTTTGTTAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 811145 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| || || ||||| || |||||||| ||||| || || Sbjct 811144 GACACGATTGAGAATGTCAAAGCCAAAATTCAAGATAAGGAAGGAATTCCTCCGGACCAG 811085 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | || ||||| ||||| ||||| || || ||| ||| | || | || || |||| Sbjct 811084 CAGAGGTTAATCTTCGCCGGAAAACAACTTGAAGATGGTCG-CACAC-TTTCTGACTATA 811027 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| |||||||| || | || ||||| | || || || || || Sbjct 811026 ATATTCAGAAGGAATCTACCTTGCATTTGGTTCTCCGTTTACGTGGTGG 810978 Score = 114 bits (126), Expect = 1e-20 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | |||||||| ||||||||||| || || | ||||| ||||| | Sbjct 810748 ATGCAAATTTTTGTCAAAACGCTTACCGGTAAAACAATCACTTTGGAAGTCGAAGCGTCG 810689 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || || ||||| |||||||| || || || || Sbjct 810688 GATACGATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810629 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || | |||||||| ||||||||||| || || || ||| | || | || || || | Sbjct 810628 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCG-TACAC-TTTCTGACTACA 810571 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| |||||||| ||| | || ||||| ||| | | ||||| || Sbjct 810570 ATATTCAGAAGGAATCCACATTGCATTTGGTTTTGAGGCTTCGCGGTGG 810522 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || || || || ||||| | ||||| || || | Sbjct 811660 ATGCAGATCTTTGTCAAAACCCTGACAGGAAAGACCATTACATTGGAAGTTGAGGCATCA 811601 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || || || ||||||||||||||||| || || ||||| Sbjct 811600 GACACGATCGAAAATGTCAAGGCCAAAATTCAAGACAAAGAAGGAATCCCCCCAGATCAG 811541 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||| || ||||| || || || | | | || ||||||||| Sbjct 811540 CAGAGATTGATCTTTGCTGGAAAACAACTTGAAGACGGCCGTACGCTTTCTGATTATAAC 811481 Query 24884 ATTCAAAAGGAATCGACA 24901 ||||| || ||||| ||| Sbjct 811480 ATTCAGAAAGAATCCACA 811463 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || || || || || || ||| | ||| | || || | Sbjct 811432 ATGCAGATTTTTGTCAAAACCCTGACAGGAAAGACCATCACGTTGGAAATTGAGGCGTCA 811373 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || || ||| ||||||||||||| || || ||||| Sbjct 811372 GACACTATCGAGAATGTCAAGGCCAAAATTCAATACAAAGAAGGAATCCCCCCGGATCAG 811313 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT--TCGAGAAACATGTCAGATTATA 24881 || | |||||||| ||||| ||||| || || ||| ||| | || | || || |||| Sbjct 811312 CAGAGATTGATCTTCGCCGGAAAACAACTTGAAGATGGTCG-CACAC-TTTCTGACTATA 811255 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | ||||| |||||||| || | || ||||| ||| | | ||||| || Sbjct 811254 ATATTCAGAAGGAATCTACCTTGCATTTGGTATTGAGGCTTCGCGGTGG 811206 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | || || | || || || || || ||| | ||||| || || | Sbjct 810976 ATGCAGATTTTTGTCAAGACATTGACAGGAAAGACCATCACGTTGGAAGTTGAGGCGTCA 810917 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || ||| || || || ||||| |||||||| || || || || Sbjct 810916 GATACTATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAAGGAATCCCACCGGACCAG 810857 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || | |||||||| ||||||||||| || || || ||| | || | || || || | Sbjct 810856 CAGAGGTTGATCTTCGCCGGGAAACAACTTGAAGACGGTCG-TACAC-TTTCTGACTACA 810799 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | |||||||||||||| ||| | || ||||| ||| | | ||||| || Sbjct 810798 ATATTCAAAAGGAATCCACATTGCATTTGGTTTTGAGGCTTCGCGGTGG 810750 >seq1153 Length=2037154 Score = 129 bits (142), Expect = 5e-25 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || ||||||||||| | ||||| || || |||||||| ||||| ||||| ||||| ||| Sbjct 1924151 ACCATGCAGATCTTCGTGAAAACCCTTACGGGTAAAACCATTACCCTCGAGGTAGAGGCC 1924092 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || || | || | || || |||||||| ||||| || ||||| || || ||| Sbjct 1924091 TCTGATACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCGCCAGAT 1924032 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| || | ||||| ||||| ||||||||||||||| | | |||| ||||| Sbjct 1924031 CAACAGCGACTCATCTTCGCCGGCAAACAGCTGGAGGATGGACGCACTTTGTCCGATTAC 1923972 Query 24881 AACATTCAAAA 24891 ||||| ||||| Sbjct 1923971 AACATCCAAAA 1923961 >seq1492 Length=1263116 Score = 118 bits (130), Expect = 1e-21 Identities = 215/311 (69%), Gaps = 14/311 (5%) Strand=Plus/Plus Query 138929 GATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTAAAT 138988 |||| || | ||| | ||| |||||||||| |||| |||||||||| ||| | || || Sbjct 355768 GATTAGATGTTTTCGTTTCTTTGATAGGATAAAAGTTAACATCGATGACTTTATCTAGAT 355827 Query 138989 TTCGCACGACCACCTTAGTCGTATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTG 139047 | || ||| | || | || || ||||| | || |||||| | || || Sbjct 355828 TACGAGTGACGATTTTCG-CGACTGTTTTAAGTTTATCGAAATCGAAAGTTTTAG---TG 355883 Query 139048 TCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCACACCGCCACT 139107 || | |||| ||| |||||||| || || |||| ||||| || || ||| Sbjct 355884 TCATTAACGA-----ACA----TGTTGACAGCGATAGATGCTAAATTGCATACAGCGACT 355934 Query 139108 TCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCT 139167 || | || | |||||| | |||||| | ||||| || || || |||| || ||| Sbjct 355935 TCTCCAGGACCCGAGTATTCAATAATTTCAGTGCACAAGTTGCTGCATTTGACAGTGCCT 355994 Query 139168 AAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCA 139227 | || || ||||| ||||||||| ||| |||||||||||||||||| ||||| ||| Sbjct 355995 ATATGCTGATGATTCGATTTTCGGTTGCAATGATCTTTGTAAAGCATATAAGGTGTTCCA 356054 Query 139228 GTTTCCACTTG 139238 ||||| ||||| Sbjct 356055 GTTTCTACTTG 356065 >seq1394 Length=3067246 Score = 93.3 bits (102), Expect = 4e-14 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 |||||| || || ||||| ||| | |||||||||||||| || || |||| || || Sbjct 201065 AGGAATTCCACCAGATCAGCAAAGATTGATCTTTGCCGGTAAGCAATTGGAAGACGGCAG 201006 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCG 24924 || |||| |||||||| || || |||||||| || ||||||| ||| |||| |||| Sbjct 201005 AACTTTGTCGGATTATAATATCCAGAAGGAATCTACTTTACACTTAGTGCTGCGCTTGC- 200947 Query 24925 CGGAGGCGGAACTGAGCCAACGAAAGA 24951 ||||||| | || ||||||||| Sbjct 200946 --GAGGCGGTGCCAAG-AAACGAAAGA 200923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449888883234000