Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1416 87.8 3e-11 >seq1416 Length=2314042 Score = 87.8 bits (96), Expect = 3e-11 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || || || || || ||| |||||| | |||| ||| ||| ||| Sbjct 952947 TGTACTTGGTTACTGCTTTCGTGCCTTCGCTGACTGCGTGCTTCGCCAATTCACCGGGCA 953006 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || | ||| || || |||||||| || | | |||||| ||||||||| Sbjct 953007 ACAGAAGTCTCACAGCCGTTTGGATCTCCCGAGAGGTGATCGTTGAGCGCTTGTTGTAAT 953066 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 |||| | | || || | | |||| | |||| | ||||||||||| ||||| Sbjct 953067 GCGCTAATCTCGATGCTTCCGCGGCGATTCTCTCGAATACATCGTTGACAAAGCTGTTCA 953126 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| ||||||| || ||| || || || ||||| | || |||| Sbjct 953127 TGATGCTCATAGCTTTGCTGGAGATTCCGGTGTCCGGATGTACTTGCTTCAATACTTTGT 953186 Query 1485710 A 1485710 | Sbjct 953187 A 953187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916081519430450