Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1248 104 3e-17 >seq1248 Length=5779413 Score = 104 bits (114), Expect = 3e-17 Identities = 153/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171608 TTAAAGAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAG 171667 || ||||||| || ||| |||| ||||| || || |||| ||| |||| || | | Sbjct 4700988 TTGAAGAACTATTGTGGTTTATCAAAGGATCGACAAATTCCAAAGAATTGTCGGACAAGG 4700929 Query 171668 GTGTTAAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTG 171727 || || | ||||| |||| |||||||| || | || || |||| || || || |||| Sbjct 4700928 GTATTCACATTTGGGATGAAAATGGTTCACGAGCTTTCTTGGATTCCTGTGGCTTCACTG 4700869 Query 171728 AAAGAAAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTC 171787 | ||| | || |||||||| || || | || || || || ||| || | || ||| Sbjct 4700868 ACAGAGAGGAGGGTGATTTGGGACCTGTGTACGGTTTCCAGTGGCGATACTTTGGTGCTG 4700809 Query 171788 AATATATCGACTGTTATACAGATTACACAGGACAAGG 171824 |||| | ||| ||||| |||||||||||||||| Sbjct 4700808 AATACAAAGACATGCATACAAATTACACAGGACAAGG 4700772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628519022208000