Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq1181 95.1 1e-14 >seq1181 Length=949089 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| |||||||| ||||| || || | ||| |||| ||| || | Sbjct 809859 AAATGCAATGTGGATTCTTTCTGAATATTATAGTCAGAAA--GTGTACGACCGTCTTCAA 809916 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || ||| ||||| || ||||| ||||||||||| ||| Sbjct 809917 GTTGTTTCCCGGCGAAGATCAACCTCTGTTGGTCCGGTGGGATTCCTTCCTTGTC-TTGA 809975 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | |||||| | | || || || | |||| ||||| Sbjct 809976 ATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCTTCGACTTCCAAAGTGATTGTTTTA 810035 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || ||||| ||||| Sbjct 810036 CCGGTAAGCGTTTTGACAAAAATTTGCAT 810064 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || ||||| |||||||| || | ||| |||| ||| || | Sbjct 810087 AAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAA--GTGTACGACCGTCTTCAA 810144 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || |||||||| || ||||| ||||||||||| ||| Sbjct 810145 GTTGTTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTC-CTGA 810203 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | |||||| | | || || || | |||| ||||| Sbjct 810204 ATTTTGGCTTTGACATTCTCGATCGTGTCCGACGCTTCGACTTCCAAAGTGATTGTTTTA 810263 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || ||||| ||||| Sbjct 810264 CCGGTAAGCGTTTTGACAAAAATTTGCAT 810292 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || ||||| |||||||| || | ||| |||| ||| || | Sbjct 810543 AAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAA--GTGTACGACCGTCTTCAA 810600 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || ||||||||| || ||||| ||||||||||| ||| Sbjct 810601 GTTGTTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCCTTGTC-CTGA 810659 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | ||| || | | || || || | |||| ||||| Sbjct 810660 ATTTTGGCTTTGACATTCTCGATCGTATCCGACGCTTCGACTTCCAAAGTGATTGTTTTA 810719 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || ||||| ||||| Sbjct 810720 CCGGTAAGCGTTTTGACAAAAATTTGCAT 810748 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| ||||| || ||| | || | | | ||||| ||||||||||| Sbjct 809640 GTAGATTCTTTCTGAATATTATAGTCGGATAAAGTCCGTCCA-TCCTCTAGCTGCTTGCC 809698 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581 |||| |||| || | || || |||||||| |||||||| || || ||| ||| | || Sbjct 809699 CGCGAAAATTAGTCTTTGTTGATCGGGAGGAATGCCTTCTTTATC-TTGAATTTTCGCCT 809757 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| |||||| | | || || || | || | ||||| || || |||| Sbjct 809758 TCACGTTTTCAATCGTGTCTGAAGCTTCGACCTCCAGCGTAATAGTTTTACCAGTGAGAG 809817 Query 133642 TTTTTACGAAAATCTGCAT 133660 |||| || ||||||||||| Sbjct 809818 TTTTGACAAAAATCTGCAT 809836 Score = 91.5 bits (100), Expect = 1e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||| || || || ||||||||||| || || | | | || || || Sbjct 811683 AAATGGAGAGTGGATTCCTTTTGAATATTGTAATCAGACAAAGTACGTCCA-TCTTCCAG 811741 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || | || | |||||||| || || ||||||||||| || || ||| Sbjct 811742 CTGCTTTCCAGCAAATATCAAACGCTGCTGATCAGGTGGGATGCCTTCTTTATCCTGGAT 811801 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 |||| || | | ||| | ||||| | | ||| || || | || | ||| || || Sbjct 811802 CTTTGCTTTTACGTTCTCGATGGTGTCAGAAGCCTCAACTTCAAGAGTTATGGTCTTCCC 811861 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCATGG 133662 ||||| || || |||||||||||||||| Sbjct 811862 GGTCAATGTCTTCACGAAAATCTGCATGG 811890 Score = 89.7 bits (98), Expect = 5e-13 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || ||||| |||||||| || | ||| |||| ||| || | Sbjct 810315 AAATGCAATGTGGATTCCTTCTGAATATTGTAGTCAGAAA--GTGTACGACCGTCTTCAA 810372 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || |||||||| || ||||| ||||||||||| ||| Sbjct 810373 GTTGTTTCCCGGCGAAGATCAACCTTTGCTGGTCCGGTGGGATTCCTTCCTTGTC-CTGA 810431 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | ||| || | | || || || | |||| ||||| Sbjct 810432 ATTTTGGCTTTGACATTCTCGATCGTATCCGACGCTTCGACTTCCAAAGTGATTGTTTTA 810491 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || ||||| || ||||| ||||| Sbjct 810492 CCGGTAAGCGTTTTGACAAAAATTTGCAT 810520 Score = 86.0 bits (94), Expect = 6e-12 Identities = 147/209 (70%), Gaps = 6/209 (3%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 ||||| | ||||| || || || |||||||| || | ||| |||| ||| || | Sbjct 810771 AAATGCAATGTGGATTCCTTTTGAATATTGTAGTCAGAAA--GTGTACGACCGTCTTCAA 810828 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 | || || || ||| | || | || ||||||||| || ||||| ||||||||||| ||| Sbjct 810829 GTTGTTTCCCGGCGAAGATCAACCTCTGCTGGTCCGGTGGGATTCCTTCCTTGTC-CTGA 810887 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 ||| || |||| | ||| | || || | | ||| || || | |||| ||| || Sbjct 810888 ATTTTGGCTTTGACATTCTCGATAGTATCTGACGCCTCAACTTCCAACGTGATGGTCTTT 810947 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || |||| || || || ||||||||||| Sbjct 810948 CCTGTCAATGTCTTGACAAAAATCTGCAT 810976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483411433722000