Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1538 100 3e-16 >seq1538 Length=2636714 Score = 100 bits (110), Expect = 3e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||| ||||||| | ||||| | |||||| ||||| || || | || || || || Sbjct 1208386 CGTGAAAATGTATCTCGGACTGGCAGAATCCTTTCCACCAGCAAGTCTTGTACCGAATTG 1208327 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || ||||| || || || | ||| ||| |||||||||||||| || | ||| || Sbjct 1208326 ACCGATGGGCTGTAGCAGATTAATGTTATTGCTACCCACGAAATTCTGCGCGAGATTAAC 1208267 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 || || || |||| || |||||||| ||||| || | || || || | |||| Sbjct 1208266 TATGGTCGCCATCAGAGACGTCTCACCGTGATGATAAGCAGAATGTTCGGCAACAGATCC 1208207 Query 152208 CGCCAACTGCGCCACCTTCA 152227 |||||| ||||| || |||| Sbjct 1208206 CGCCAATTGCGCGACTTTCA 1208187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547205397690000