Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq1248 96.9 3e-15 >seq1248 Length=5779413 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||||||||||||||| |||| | || || ||||| || ||||| ||||| Sbjct 4700416 ACATGAGCGATCATGTACGTCAGCAAGGAATATGACGCTATGTTAAATGGCACTCCTAAA 4700475 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAAT 6736 ||||||||| | || |||||| ||||| ||||| || || || ||||| ||| Sbjct 4700476 CCCATGTCTGCGCTTCTTTGATAAAGCTGCGTGGACAATTCTCCGTTATTTACGTAAAAT 4700535 Query 6737 TGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCG 6796 || | ||||||||||| || | |||||| || | ||| ||| ||||| || Sbjct 4700536 TGTACCAAAGTGTGGCACGGCGGCAATGCCATCTTTGGAATATCAACCGGATTCCAGGCT 4700595 Query 6797 CACATCACGATCCTTCTGTCATCAGG 6822 |||| | || | ||| || ||||| Sbjct 4700596 GACATTATAATACGTCTATCCTCAGG 4700621 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 ||||| || ||| | || | |||| || ||||| ||| ||| | || |||||| Sbjct 4700621 CCTGAGGATAGACGTATTATAATGTCAGCCTGGAATCCGGTTGATATTCCAAAGATGGCA 4700562 Query 34583 CTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAG 34642 | || ||||||||||| | ||||| ||||| || || || ||||| ||| Sbjct 4700561 TTGCCGCCGTGCCACACTTTGGTACAATTTTACGTAAATAACGGAGAATTGTCCACGCAG 4700502 Query 34643 CTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCT 34702 || |||||| || | ||||||||| ||||| ||||| || ||||| || || | Sbjct 4700501 CTTTATCAAAGAAGCGCAGACATGGGTTTAGGAGTGCCATTTAACATAGCGTCATATTCC 4700442 Query 34703 CTGCTCACGTACATGATCGCTCATGT 34728 |||| |||||||||||||||||||| Sbjct 4700441 TTGCTGACGTACATGATCGCTCATGT 4700416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448253714916000