Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Atta_20colombica_20[refseq_20GCF_5F001594045.1_202016-03-25] 1,550 sequences; 291,257,934 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1238 111 2e-19 >seq1238 Length=3292682 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 ||||||| ||| | ||||| || ||||| || ||| |||||| |||||||||||| Sbjct 3273225 TTTTCTTTTGGATCAGAAATATAAGTTTCAATGAGCAAAGAATACATCTCAGAATGAATA 3273284 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTA 23880 ||||| || ||||| ||||| ||||| ||||| | ||||| || | || || || | Sbjct 3273285 TTTTCTATGGCAATTTGAAAGCCATAGAAACAACGTGCTTCGGAAATTTTCACTTCTTGG 3273344 Query 23881 AAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGA 23940 ||||| | | || ||| || ||||| |||||||| ||| ||||| || || | | Sbjct 3273345 CTGAATCTCTCAATTAGATTCTCATTAACGATACCATCGGAAGCGGCAAAAAATGCTAAA 3273404 Query 23941 ACATATTTTATAAAATGTCTTTCATC 23966 |||| |||||| || | ||||| Sbjct 3273405 ACATGAGAGATAAAACGTTTCTCATC 3273430 Score = 86.0 bits (94), Expect = 7e-12 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||| | ||||||||| || | |||||| || || || || || ||||| Sbjct 3272021 CCTGGCATGACTCCTCGTTTCTTTAGCCAAAAAATGGCTGCGAAACTGCCACTGAAGAAG 3272080 Query 23629 ATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAA 23688 ||||||||||| |||||||| || || | |||| ||| || || | | || | Sbjct 3272081 ATACCCTCAACTGCCGCAAATGCGACTACACGTTCGGGAAACGTAGCGCTCTCATGATTG 3272140 Query 23689 ATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTT 23748 ||||| ||| || ||||||||||||| || ||||| || ||| ||||| || || Sbjct 3272141 ATCCAGTTTAATGCCCAATTAGCCTTCTTCTTGACACAAGGAAGTGTCTCAATCGCATTA 3272200 Query 23749 AA 23750 || Sbjct 3272201 AA 3272202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521477896170000