Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7164 150 4e-31 seq7106 95.1 3e-14 seq7134 93.3 9e-14 seq7150 91.5 3e-13 seq7124 91.5 3e-13 seq2054 89.7 1e-12 >seq7164 Length=6205789 Score = 150 bits (166), Expect = 4e-31 Identities = 303/446 (68%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 281573 AATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGAT 281632 ||| || || |||||||| || ||||||||| | |||||| ||||||| | || || Sbjct 6011350 AATCTTTGTGGACCAACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTAT 6011409 Query 281633 AATAGGTACATAACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAG 281692 ||| |||| ||| |||| ||||||||| || | |||||||||| ||| ||| | Sbjct 6011410 AATTGGTATATACCATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAA 6011469 Query 281693 GTTATCATCTGTATCGACGAAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATA 281752 ||| || | | ||| | |||||||| || || | ||||| ||||| Sbjct 6011470 TGGATCGTCGGCTGGGTGGAATATGAGTCGCGTCAACGGTGACATTAAGGTGAAAATATA 6011529 Query 281753 CCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAA 281812 | || ||||| ||||||||||||||||| | | || || ||||| ||| Sbjct 6011530 ACGAGCGCTCGCACAATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTC 6011589 Query 281813 CAACCAGTTAATGTTA-TTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCT 281871 ||| | ||||| ||| ||| |||| ||||||| || |||| ||||| || || ||| Sbjct 6011590 CAATAAATTAATATTATTTGATCCC-ACGTAATTTTGCGCCAAATTGACTATGGTAGCCT 6011648 Query 281872 GAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTG 281931 | || || | ||||||||| || |||||| ||| || || ||||| || || | Sbjct 6011649 GCAGTGACATCTCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCG 6011708 Query 281932 CTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAG 281991 | || ||||| || | | ||| ||||||||| | | | | ||||| ||||| Sbjct 6011709 CAACTTTCACCTCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGC 6011768 Query 281992 AAGGCTTGAAACCATCAACGACAGAC 282017 ||||| |||||||| || ||||| Sbjct 6011769 CTGGCTTAAAACCATCTAC--CAGAC 6011792 >seq7106 Length=1862430 Score = 95.1 bits (104), Expect = 3e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766 |||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||| Sbjct 1583623 CTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1583682 Query 165767 AGCCCCACGATGGGC 165781 ||||||||| ||||| Sbjct 1583683 AGCCCCACGTTGGGC 1583697 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1673950 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1673891 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1673890 CCCACGTTGGGC 1673879 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1752516 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1752457 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1752456 CCCACGTTGGGC 1752445 >seq7134 Length=2137532 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 1815079 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1815138 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 1815139 GCCCCACGTTGGGC 1815152 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767 ||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct 1816185 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1816244 Query 165768 GCCCCACGATGGGC 165781 |||||||| ||||| Sbjct 1816245 GCCCCACGTTGGGC 1816258 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 956916 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 956857 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 956856 CCCCACGTTGGGC 956844 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 958179 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 958120 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 958119 CCCACGTTGGGC 958108 >seq7150 Length=3231331 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 442983 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 443042 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 443043 CCCCACGTTGGGC 443055 >seq7124 Length=1966528 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||| Sbjct 1846709 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1846650 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 1846649 CCCCACGTTGGGC 1846637 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1841308 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1841249 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1841248 CCCACGTTGGGC 1841237 >seq2054 Length=2480 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 2202 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2143 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2142 CCCACGTTGGGC 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057726876550580