Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq7164 150 4e-31
seq7106 95.1 3e-14
seq7134 93.3 9e-14
seq7150 91.5 3e-13
seq7124 91.5 3e-13
seq2054 89.7 1e-12
>seq7164
Length=6205789
Score = 150 bits (166), Expect = 4e-31
Identities = 303/446 (68%), Gaps = 4/446 (1%)
Strand=Plus/Plus
Query 281573 AATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCATTTACCAAAATACTCGGGAT 281632
||| || || |||||||| || ||||||||| | |||||| ||||||| | || ||
Sbjct 6011350 AATCTTTGTGGACCAACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTAT 6011409
Query 281633 AATAGGTACATAACATTCTGGTTCAATTTTATCACCATCATCATACAAATACTTCAGAAG 281692
||| |||| ||| |||| ||||||||| || | |||||||||| ||| ||| |
Sbjct 6011410 AATTGGTATATACCATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAA 6011469
Query 281693 GTTATCATCTGTATCGACGAAAACCTGTCGCGTCTTAGGGTTCAGTTTCGTGAAGATATA 281752
||| || | | ||| | |||||||| || || | ||||| |||||
Sbjct 6011470 TGGATCGTCGGCTGGGTGGAATATGAGTCGCGTCAACGGTGACATTAAGGTGAAAATATA 6011529
Query 281753 CCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAA 281812
| || ||||| ||||||||||||||||| | | || || ||||| |||
Sbjct 6011530 ACGAGCGCTCGCACAATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTC 6011589
Query 281813 CAACCAGTTAATGTTA-TTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCT 281871
||| | ||||| ||| ||| |||| ||||||| || |||| ||||| || || |||
Sbjct 6011590 CAATAAATTAATATTATTTGATCCC-ACGTAATTTTGCGCCAAATTGACTATGGTAGCCT 6011648
Query 281872 GAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGCAACATAACCACTGAACTGTG 281931
| || || | ||||||||| || |||||| ||| || || ||||| || || |
Sbjct 6011649 GCAGTGACATCTCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCG 6011708
Query 281932 CTACCTTCACGTCTGATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAG 281991
| || ||||| || | | ||| ||||||||| | | | | ||||| |||||
Sbjct 6011709 CAACTTTCACCTCACGTTTGTCGTTACGTTTGAAACAGGTAAACATAACTTTGCGTTGGC 6011768
Query 281992 AAGGCTTGAAACCATCAACGACAGAC 282017
||||| |||||||| || |||||
Sbjct 6011769 CTGGCTTAAAACCATCTAC--CAGAC 6011792
>seq7106
Length=1862430
Score = 95.1 bits (104), Expect = 3e-14
Identities = 66/75 (88%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 165707 CTTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCG 165766
|||||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||
Sbjct 1583623 CTTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCG 1583682
Query 165767 AGCCCCACGATGGGC 165781
||||||||| |||||
Sbjct 1583683 AGCCCCACGTTGGGC 1583697
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 1673950 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1673891
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1673890 CCCACGTTGGGC 1673879
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 1752516 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1752457
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1752456 CCCACGTTGGGC 1752445
>seq7134
Length=2137532
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 1815079 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1815138
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 1815139 GCCCCACGTTGGGC 1815152
Score = 93.3 bits (102), Expect = 9e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 165708 TTGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGA 165767
||||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||
Sbjct 1816185 TTGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 1816244
Query 165768 GCCCCACGATGGGC 165781
|||||||| |||||
Sbjct 1816245 GCCCCACGTTGGGC 1816258
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 956916 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 956857
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 956856 CCCCACGTTGGGC 956844
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 958179 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 958120
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 958119 CCCACGTTGGGC 958108
>seq7150
Length=3231331
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 442983 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 443042
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 443043 CCCCACGTTGGGC 443055
>seq7124
Length=1966528
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 1846709 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1846650
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 1846649 CCCCACGTTGGGC 1846637
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 1841308 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1841249
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 1841248 CCCACGTTGGGC 1841237
>seq2054
Length=2480
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 2202 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 2143
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 2142 CCCACGTTGGGC 2131
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057726876550580
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |