Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 192 6e-44
seq7143 89.7 5e-13
>seq7155
Length=3116674
Score = 192 bits (212), Expect = 6e-44
Identities = 465/699 (67%), Gaps = 24/699 (3%)
Strand=Plus/Plus
Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT--AAGTCGT 16093
||| || |||||||| ||||| | |||||| | |||||| || || || || ||
Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTC-- 2758651
Query 16094 ACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCG 16153
||||| | ||| | ||||| |||| || || || ||| ||||| ||| || ||
Sbjct 2758652 ACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCA 2758711
Query 16154 GTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213
|| | | ||| | || ||| |||| ||||| | ||| ||||||||
Sbjct 2758712 ACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 2758771
Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273
||||| ||||| || |||| || ||||| |||||||| || || |||||||||
Sbjct 2758772 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 2758831
Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAA 16331
|| |||||||| | |||||| |||| |||||| || | | ||| ||| ||||| ||||
Sbjct 2758832 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAGATACCTTCAA 2758889
Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA----ATCCAT 16387
| | ||||| || |||| ||||| | | | || | | | ||| |||||
Sbjct 2758890 CGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGC----TGACTTCGAGGAAATCCAA 2758945
Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA- 16446
| |||| || || || | |||| | ||| || ||||| || || || ||
Sbjct 2758946 GCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAG 2759005
Query 16447 ---TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503
|| || | |||| | || | ||||| |||||||| | || || ||||||||
Sbjct 2759006 TAATTCCTTTGTTTCGAG----TCCTTAATATATGTATCAATTAATATGCTATACATTTC 2759061
Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563
|| || | ||||| || || || ||||||||||||||||| || ||||| | | |||
Sbjct 2759062 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 2759121
Query 16564 TACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAA 16623
|||||| | | || ||||| | | || |||||||| ||||| ||| ||| || ||
Sbjct 2759122 GACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 2759181
Query 16624 AAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTT 16683
||| || || | ||| ||| |||| | ||| | | || ||| |||||| |
Sbjct 2759182 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATC 2759241
Query 16684 TAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722
| |||||| || | ||| ||||| ||| ||||| ||
Sbjct 2759242 CATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280
>seq7143
Length=2789641
Score = 89.7 bits (98), Expect = 5e-13
Identities = 137/193 (71%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATA-CA 119072
||||| || ||||||| |||| | || ||||| || || || ||||| || || ||
Sbjct 1275191 CCCACATAACCGTTGGAATCTCTGCCATCTAAACTATATTTGTCATTTAAATAAATTGCA 1275132
Query 119073 GACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACAT 119132
| || | |||| ||| || | ||| |||||||||||| ||||| ||||| ||| |
Sbjct 1275131 GTTTCT-AGCGCAGCTTCTGGTGACTTGGACCATTCCAGTATCTTTTTGGCCCAATACTT 1275073
Query 119133 ACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAG 119192
||| | | | ||||||||||| || || || || || ||||| || | ||||| ||
Sbjct 1275072 ACGAAGAAATCCGTGCATTTTGCCTTCACGAACCAGTTGTAGTTGAGCTGCATTCCAGAG 1275013
Query 119193 AGGATCGTGTGTA 119205
||| ||||||
Sbjct 1275012 GTCATCATGTGTA 1275000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511368590055120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |