Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq7155 192 6e-44 seq7143 89.7 5e-13 >seq7155 Length=3116674 Score = 192 bits (212), Expect = 6e-44 Identities = 465/699 (67%), Gaps = 24/699 (3%) Strand=Plus/Plus Query 16036 ATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTAT--AAGTCGT 16093 ||| || |||||||| ||||| | |||||| | |||||| || || || || || Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTC-- 2758651 Query 16094 ACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATATCG 16153 ||||| | ||| | ||||| |||| || || || ||| ||||| ||| || || Sbjct 2758652 ACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCA 2758711 Query 16154 GTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGAAGTCG 16213 || | | ||| | || ||| |||| ||||| | ||| |||||||| Sbjct 2758712 ACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 2758771 Query 16214 CAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTT 16273 ||||| ||||| || |||| || ||||| |||||||| || || ||||||||| Sbjct 2758772 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 2758831 Query 16274 CCTCGTTTCTTTAACCAGAATATCGCAGCAAA--TGACCCCGAAAAGAATATACCCTCAA 16331 || |||||||| | |||||| |||| |||||| || | | ||| ||| ||||| |||| Sbjct 2758832 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAGATACCTTCAA 2758889 Query 16332 CAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA----ATCCAT 16387 | | ||||| || |||| ||||| | | | || | | | ||| ||||| Sbjct 2758890 CGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGC----TGACTTCGAGGAAATCCAA 2758945 Query 16388 TTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAA- 16446 | |||| || || || | |||| | ||| || ||||| || || || || Sbjct 2758946 GCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAG 2759005 Query 16447 ---TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503 || || | |||| | || | ||||| |||||||| | || || |||||||| Sbjct 2759006 TAATTCCTTTGTTTCGAG----TCCTTAATATATGTATCAATTAATATGCTATACATTTC 2759061 Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563 || || | ||||| || || || ||||||||||||||||| || ||||| | | ||| Sbjct 2759062 AGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTG 2759121 Query 16564 TACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAA 16623 |||||| | | || ||||| | | || |||||||| ||||| ||| ||| || || Sbjct 2759122 GACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAA 2759181 Query 16624 AAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATCTTT 16683 ||| || || | ||| ||| |||| | ||| | | || ||| |||||| | Sbjct 2759182 AAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATC 2759241 Query 16684 TAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAA 16722 | |||||| || | ||| ||||| ||| ||||| || Sbjct 2759242 CATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280 >seq7143 Length=2789641 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 119014 CCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTTATCGTTTAAGTAGATA-CA 119072 ||||| || ||||||| |||| | || ||||| || || || ||||| || || || Sbjct 1275191 CCCACATAACCGTTGGAATCTCTGCCATCTAAACTATATTTGTCATTTAAATAAATTGCA 1275132 Query 119073 GACGCTTAACGCACTTTCCGGAGTCTTACTCCATTCCAGTAtttttttAGCCCAGTACAT 119132 | || | |||| ||| || | ||| |||||||||||| ||||| ||||| ||| | Sbjct 1275131 GTTTCT-AGCGCAGCTTCTGGTGACTTGGACCATTCCAGTATCTTTTTGGCCCAATACTT 1275073 Query 119133 ACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGAAGTTGTGCGGTGTTCCATAG 119192 ||| | | | ||||||||||| || || || || || ||||| || | ||||| || Sbjct 1275072 ACGAAGAAATCCGTGCATTTTGCCTTCACGAACCAGTTGTAGTTGAGCTGCATTCCAGAG 1275013 Query 119193 AGGATCGTGTGTA 119205 ||| |||||| Sbjct 1275012 GTCATCATGTGTA 1275000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511368590055120