Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq7133 150 1e-31 >seq7133 Length=2056560 Score = 150 bits (166), Expect = 1e-31 Identities = 412/624 (66%), Gaps = 8/624 (1%) Strand=Plus/Minus Query 101645 GGAAACGGTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAG 101704 ||||||| | ||| ||||||| ||||| ||| | || ||||| |||| |||| Sbjct 1569274 GGAAACGCCCGAGGTTTTCGCGTTAACTGTTCTTTTAATGCTTCAATATGATTATTATAG 1569215 Query 101705 ATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCA 101764 | || ||||| || | ||| |||| || || || || |||| ||| | ||||||| Sbjct 1569214 ACATGTGCATCGCCCAAAGTGTGGACGAAATCCCCTGGTCGGAGATCAGTAATATGAGCA 1569155 Query 101765 ATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCA 101824 ||||| | || | | || || ||||| |||||||| || || || |||||||| Sbjct 1569154 ATCATATAGGTAAGCAAAGCGTACGAGGCAATATTAAATGGTACACCCAATCCCATATCG 1569095 Query 101825 GCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTTAAT 101884 || | ||| || | |||||| || | || ||||| ||| ||||||| || Sbjct 1569094 GCACTGCGTTGGTATAATTGACAAGATAACTCTCCATTGGCAACAAAAAATTG-TGCAAG 1569036 Query 101885 AC-ATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACATTAA 101943 || ||||||||| || | |||||| ||| || || | |||||||||| |||||| Sbjct 1569035 ACAATGACAAGGTGGTAGAGCCATTTGAGGGATATCGACAGGATTCCAAGCAGACATTAT 1568976 Query 101944 CATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTCAAC 102003 || | || ||| | || || || | || || ||||| | || | | ||| || | Sbjct 1568975 AATACGTCGATCATTTGGATTATTTCTGATTGTGTCAATTACTTGCTGAAGTTGATCTAT 1568916 Query 102004 TCCTTCTCCTTTATAATCGCGCCCAACACCTT-TATATTCTGCTCCGAAATGCCTCCACT 102062 || || |||| ||| | | || || | || | || || ||||| | ||||| Sbjct 1568915 ACCCTCATCTTTGTAA-CTGTCTTTGCAGTTTCTGTACTTGGCCCCAAAATGACGCCACT 1568857 Query 102063 GAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTTATCTA 102122 |||| ||||| || || || ||||| ||||| || || || |||| || ||| |||| Sbjct 1568856 GAAAACCATAAACTGGGCCTAGATCACCTTCCTCCCTATCGGAAAATCCGCATTTGTCTA 1568797 Query 102123 AAAATGATCTAGAT--CCATTCGCATCCCAAATGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | || || ||| | || ||||||| ||||| | | || || ||| Sbjct 1568796 AGAA--CTCCCGATTACTGTTTCCATCCCATATGTGAATATTTTTTTCTTGAAGTATTTT 1568739 Query 102181 GCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAAATAC 102240 ||| || || | |||||||| || ||||||| | ||| | | ||||||||| Sbjct 1568738 AGCGTCTGTTTTACCATGAACAAACCACAGCAATTCTTCAGCGACAGCACGCCAAAATAC 1568679 Query 102241 TCTCTTAGTAGTTAAAAGTGGAAA 102264 || ||| ||||||| | |||||| Sbjct 1568678 TCGCTTTGTAGTTAGTAATGGAAA 1568655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361219649900666