Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq7104 104 2e-17 >seq7104 Length=1453772 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| ||| | || || ||||| ||||| ||||| || || ||||| Sbjct 421934 AAAATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCA 421993 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || |||| || ||| || |||||||| | ||| |||| Sbjct 421994 TCCGATACTATTGAAAATGTTAAAGCTAAGATTCAAGACAAAGAAGGAATCCCCCCAGAT 422053 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | | |||||||| || |||||||||||||| ||| || |||||||| Sbjct 422054 CAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTAC 422113 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || || |||||||| ||||| ||||| |||| | || |||| || || Sbjct 422114 AACATCCAGAAGGAGTCTACACTTCATTTGGTTCTTCGTCTACGTGGTGG 422163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428298591007730