Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq7143 84.2 4e-11 >seq7143 Length=2789641 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496 || || ||| |||||||||||| ||||| ||||| || | | |||| ||||| ||| Sbjct 1271237 ACCCACGATGATCTATGGAACGCAGCACAACTGCAGTTGTTACGCGAAGCCAAAATACAT 1271296 Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556 |||| | || ||||||||||| || |||||||| || ||| || || ||||| | Sbjct 1271297 GGTTTCCTGCGTATGTATTGGGCAAAAAAGATACTGGAGTGGTCTTCTACGCCTGATGCT 1271356 Query 189557 GCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAA 189615 ||||| || | || || | |||||| | || || |||| || ||||| || Sbjct 1271357 GCTTT-AGAAACAGCAATTTTTTTGAATGATAAATATAGTTTAGATGGTTTAGATCCAAA 1271415 Query 189616 CGGATACGTAGGT 189628 |||||| || ||| Sbjct 1271416 CGGATATGTTGGT 1271428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923114104646640