Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq7143 84.2 4e-11
>seq7143
Length=2789641
Score = 84.2 bits (92), Expect = 4e-11
Identities = 136/193 (70%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 189437 ACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCAT 189496
|| || ||| |||||||||||| ||||| ||||| || | | |||| ||||| |||
Sbjct 1271237 ACCCACGATGATCTATGGAACGCAGCACAACTGCAGTTGTTACGCGAAGCCAAAATACAT 1271296
Query 189497 AGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGAC 189556
|||| | || ||||||||||| || |||||||| || ||| || || ||||| |
Sbjct 1271297 GGTTTCCTGCGTATGTATTGGGCAAAAAAGATACTGGAGTGGTCTTCTACGCCTGATGCT 1271356
Query 189557 GCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAA 189615
||||| || | || || | |||||| | || || |||| || ||||| ||
Sbjct 1271357 GCTTT-AGAAACAGCAATTTTTTTGAATGATAAATATAGTTTAGATGGTTTAGATCCAAA 1271415
Query 189616 CGGATACGTAGGT 189628
|||||| || |||
Sbjct 1271416 CGGATATGTTGGT 1271428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923114104646640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |