Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq6874 111 2e-19
seq7134 104 3e-17
seq7141 96.9 4e-15
seq7106 93.3 5e-14
seq6975 91.5 2e-13
>seq6874
Length=275246
Score = 111 bits (122), Expect = 2e-19
Identities = 74/81 (91%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 60058 AAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116
||||| ||||||| |||| ||||||||||||| ||||||||||||||||||||| ||||
Sbjct 256444 AAAATATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 256503
Query 60117 TCACCACTATACTACCGAGGA 60137
| |||||||||||||||||||
Sbjct 256504 TGACCACTATACTACCGAGGA 256524
>seq7134
Length=2137532
Score = 104 bits (114), Expect = 3e-17
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| |||| ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 104813 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 104754
Query 60126 TACTACCGAGGA 60137
||||||||||||
Sbjct 104753 TACTACCGAGGA 104742
Score = 96.9 bits (106), Expect = 4e-15
Identities = 71/83 (86%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 60058 AAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 60117
|| |||| |||| || | |||||| |||||| ||||||||||||||||||||| |||||
Sbjct 1169574 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1169633
Query 60118 CACCACTATACTACCGAGGATTG 60140
|||||||||||| |||||| ||
Sbjct 1169634 GACCACTATACTATCGAGGACTG 1169656
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 57091 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 57150
Query 60126 TACTACCGAGGATT 60139
||||| ||||||||
Sbjct 57151 TACTATCGAGGATT 57164
Score = 93.3 bits (102), Expect = 5e-14
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1799550 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1799609
Query 60126 TACTACCGAGGAT-TGAA 60142
||||| ||||||| ||||
Sbjct 1799610 TACTATCGAGGATGTGAA 1799627
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 108636 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 108695
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 108696 ATACTATCGAGGA 108708
>seq7141
Length=2858276
Score = 96.9 bits (106), Expect = 4e-15
Identities = 73/85 (86%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123
|||||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 1723039 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 1723098
Query 60124 TATACTACCGAGGA--TTGAATATA 60146
||||||| |||||| ||||| |||
Sbjct 1723099 TATACTATCGAGGATGTTGAAAATA 1723123
>seq7106
Length=1862430
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1615362 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1615303
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 1615302 ATACTATCGAGGAT 1615289
Score = 93.3 bits (102), Expect = 5e-14
Identities = 65/74 (88%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1617423 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1617364
Query 60125 ATACTACCGAGGAT 60138
|||||| |||||||
Sbjct 1617363 ATACTATCGAGGAT 1617350
Score = 93.3 bits (102), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1726474 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1726533
Query 60125 ATACTACCGAGGATTG 60140
|||||| |||||| ||
Sbjct 1726534 ATACTATCGAGGACTG 1726549
>seq6975
Length=485666
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 350228 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 350169
Query 60126 TACTACCGAGGAT 60138
||||| |||||||
Sbjct 350168 TACTATCGAGGAT 350156
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 357607 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 357548
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 357547 TACTATCGAGGA 357536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571766379438480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |