Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq7141 93.3 6e-14 seq3141 86.0 9e-12 >seq7141 Length=2858276 Score = 93.3 bits (102), Expect = 6e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 10407 AAAACTGATTTAATTATAGAAATTCCTAAAGGATGTTATGCAAGATTAGCTCCCAGATCT 10466 || |||||||| || || |||| | |||| ||| | | | | || || | ||| Sbjct 159681 AAGACTGATTTGCAAGTACAAGTTCCAGAGGGATCTTACGGACGTGTCGCGCCACGCTCT 159740 Query 10467 GATTTAGCTCTAAATAAATTTATTGATATTGGAGCTGGAGTAATTGACGAAGATTATAGA 10526 | ||||| | || || ||||| ||| |||| |||||||| | || ||||| || | Sbjct 159741 GGACTAGCTGTTAAGAACTTTATAGATGTTGGTGCTGGAGTCGTAGATGAAGACTACCGT 159800 Query 10527 GGAAATGTGGGAGTAATATTATTTAATCATTCTAATGAAGATTTTATAATAAATAGAGGA 10586 || || |||| || |||||||||||||||| |||||||||| | | || ||||| Sbjct 159801 GGTAACTTGGGTGTTGTATTATTTAATCATTCAGATGAAGATTTCGAAGTGAAACGAGGA 159860 Query 10587 GATAGAATATCTCAATTAATATGTGA 10612 || | || ||||||| || ||||| Sbjct 159861 GACCGCATTGCTCAATTTATCTGTGA 159886 >seq3141 Length=2848 Score = 86.0 bits (94), Expect = 9e-12 Identities = 151/228 (66%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||||||||| | | ||| ||||| || ||||| ||||| |||||||| || | Sbjct 1570 CCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGCC 1511 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | || | | ||| || ||||| ||||| || ||||| | | || ||||| || ||| Sbjct 1510 AATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGGCGGA 1451 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 |||||||| |||||||| |||||| ||| || || Sbjct 1450 ATTCCTTCCTTATCTTGAATTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTCAACC 1391 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 || || ||||| || ||||| || | ||||| | ||| ||||||||| Sbjct 1390 TCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCATT 1343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743459798622720