Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq7133 156 3e-33
>seq7133
Length=2056560
Score = 156 bits (172), Expect = 3e-33
Identities = 411/620 (66%), Gaps = 8/620 (1%)
Strand=Plus/Plus
Query 20036 GAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGT 20095
||||| ||||| ||| ||||||| || || ||||||||| | || | |||||| |
Sbjct 1568647 GAAATAGTTTTCCATTACTAACTACAAAGCGAGTATTTTGGCGTGCTGTCGCTGAAGAAT 1568706
Query 20096 TATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGA 20155
| | |||||| || | || |||| | ||| ||| ||||||| || | |
Sbjct 1568707 TGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCAAGAAAAAAATATTCACA 1568766
Query 20156 TTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATG--GATTTGACAACCGTCA 20213
| ||| | | | | | | | || ||| ||| |||| ||||| | | | |
Sbjct 1568767 TATGGGATGGAAACAGTAATCGGGAGTTCTTAGACA--AATGCGGATTTTCCGATAGGGA 1568824
Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273
|| || ||| | || || || ||||| ||||| ||| | |||||||| || | ||
Sbjct 1568825 GGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACAG 1568884
Query 20274 TGACATGAACACAAA-TTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332
|| || | | | | ||| | | || |||||||| | || | || ||| |
Sbjct 1568885 AAAC-TGCAAAGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAGTAATTGACA 1568943
Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392
||| | || || ||||| || || | ||||| | | || ||||| || |||
Sbjct 1568944 CAATCAGAAATAATCCAAATGATCGACGTATTATAATGTCTGCTTGGAATCCTGTCGATA 1569003
Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAAT 20451
| ||| ||||||| | || || |||||| || ||| ||||||| ||||| |||
Sbjct 1569004 TCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTTTTTGTTGCCAATGGA 1569062
Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511
|| || || |||||| | || ||||| || ||||||||| ||||||| || || |||
Sbjct 1569063 GAGTTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAAT 1569122
Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571
||||| || || ||||||| ||||||||||| ||| |||| ||| | | | ||
Sbjct 1569123 ATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGGG 1569182
Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631
|| || |||||||| | || || || ||| | || ||||||||| ||| | ||||||
Sbjct 1569183 GATTTCGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAAA 1569242
Query 20632 TTACAGTTAACACGACAACC 20651
||||||||| ||| ||||
Sbjct 1569243 GAACAGTTAACGCGAAAACC 1569262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399149137015870
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |