Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq7133 156 3e-33 >seq7133 Length=2056560 Score = 156 bits (172), Expect = 3e-33 Identities = 411/620 (66%), Gaps = 8/620 (1%) Strand=Plus/Plus Query 20036 GAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGT 20095 ||||| ||||| ||| ||||||| || || ||||||||| | || | |||||| | Sbjct 1568647 GAAATAGTTTTCCATTACTAACTACAAAGCGAGTATTTTGGCGTGCTGTCGCTGAAGAAT 1568706 Query 20096 TATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGA 20155 | | |||||| || | || |||| | ||| ||| ||||||| || | | Sbjct 1568707 TGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCAAGAAAAAAATATTCACA 1568766 Query 20156 TTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATG--GATTTGACAACCGTCA 20213 | ||| | | | | | | | || ||| ||| |||| ||||| | | | | Sbjct 1568767 TATGGGATGGAAACAGTAATCGGGAGTTCTTAGACA--AATGCGGATTTTCCGATAGGGA 1568824 Query 20214 AGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT 20273 || || ||| | || || || ||||| ||||| ||| | |||||||| || | || Sbjct 1568825 GGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTTTGGGGCCAAGTACAG 1568884 Query 20274 TGACATGAACACAAA-TTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATT 20332 || || | | | | ||| | | || |||||||| | || | || ||| | Sbjct 1568885 AAAC-TGCAAAGACAGTTACAAAGATGAGGGTATAGATCAACTTCAGCAAGTAATTGACA 1568943 Query 20333 TAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATG 20392 ||| | || || ||||| || || | ||||| | | || ||||| || ||| Sbjct 1568944 CAATCAGAAATAATCCAAATGATCGACGTATTATAATGTCTGCTTGGAATCCTGTCGATA 1569003 Query 20393 TGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAAT 20451 | ||| ||||||| | || || |||||| || ||| ||||||| ||||| ||| Sbjct 1569004 TCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTTTTTGTTGCCAATGGA 1569062 Query 20452 GAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAAT 20511 || || || |||||| | || ||||| || ||||||||| ||||||| || || ||| Sbjct 1569063 GAGTTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTGGGTGTACCATTTAAT 1569122 Query 20512 ATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGT 20571 ||||| || || ||||||| ||||||||||| ||| |||| ||| | | | || Sbjct 1569123 ATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACTGATCTCCGACCAGGG 1569182 Query 20572 GACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAAAA 20631 || || |||||||| | || || || ||| | || ||||||||| ||| | |||||| Sbjct 1569183 GATTTCGTCCACACTTTGGGCGATGCACATGTCTATAATAATCATATTGAAGCATTAAAA 1569242 Query 20632 TTACAGTTAACACGACAACC 20651 ||||||||| ||| |||| Sbjct 1569243 GAACAGTTAACGCGAAAACC 1569262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399149137015870