Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq7155 230 2e-55 >seq7155 Length=3116674 Score = 230 bits (254), Expect = 2e-55 Identities = 380/544 (70%), Gaps = 6/544 (1%) Strand=Plus/Plus Query 14184 TTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAA 14243 ||| ||||| || || ||||| || || ||||||||||| |||||||||| ||| | Sbjct 2758740 TTAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTA 2758799 Query 14244 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG 14303 |||| || |||||||| || |||||||| || || ||||| || | ||| || || | || Sbjct 2758800 GTTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAG 2758859 Query 14304 CGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAA 14363 | || || ||||| || || ||||| |||||||| || |||| ||||| |||| Sbjct 2758860 CAAAACTGCCACTGAAGAAGATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAA 2758919 Query 14364 ACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAAT 14423 | ||| || || ||||| ||||| || | || || | | Sbjct 2758920 AGTTGGCTGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAG 2758979 Query 14424 CCATTGTTTCAATAGCATTAAATAAATG-TTCCTTCTCTTT--AGTACTTGAAATGTATG 14480 |||||| || |||||||| ||||| | |||||| | ||| ||| ||| ||| |||| Sbjct 2758980 GCATTGTCTCTATAGCATTGAATAAGTAATTCCTT-TGTTTCGAGTCCTT--AATATATG 2759036 Query 14481 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT 14540 ||||||| | || ||||||||||||||| || | || ||||| || || ||||| |||| Sbjct 2759037 TATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCAT 2759096 Query 14541 AAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCAT 14600 | || || | || |||| | ||| || || | | || | ||| | | |||||||| Sbjct 2759097 AGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCAT 2759156 Query 14601 TAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14660 | || ||||||||| || || ||||| || || | || | |||||| | | | || | Sbjct 2759157 TCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCAT 2759216 Query 14661 CATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCC 14720 || |||| | |||||| | | ||| ||||||||||||||||| || ||||||| Sbjct 2759217 TATCAGTGAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCC 2759276 Query 14721 AAAA 14724 | || Sbjct 2759277 AGAA 2759280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482302393892880