Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 230 2e-55
>seq7155
Length=3116674
Score = 230 bits (254), Expect = 2e-55
Identities = 380/544 (70%), Gaps = 6/544 (1%)
Strand=Plus/Plus
Query 14184 TTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAA 14243
||| ||||| || || ||||| || || ||||||||||| |||||||||| ||| |
Sbjct 2758740 TTAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTA 2758799
Query 14244 GTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG 14303
|||| || |||||||| || |||||||| || || ||||| || | ||| || || | ||
Sbjct 2758800 GTTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAG 2758859
Query 14304 CGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAA 14363
| || || ||||| || || ||||| |||||||| || |||| ||||| ||||
Sbjct 2758860 CAAAACTGCCACTGAAGAAGATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAA 2758919
Query 14364 ACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAAT 14423
| ||| || || ||||| ||||| || | || || | |
Sbjct 2758920 AGTTGGCTGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAG 2758979
Query 14424 CCATTGTTTCAATAGCATTAAATAAATG-TTCCTTCTCTTT--AGTACTTGAAATGTATG 14480
|||||| || |||||||| ||||| | |||||| | ||| ||| ||| ||| ||||
Sbjct 2758980 GCATTGTCTCTATAGCATTGAATAAGTAATTCCTT-TGTTTCGAGTCCTT--AATATATG 2759036
Query 14481 TATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCAT 14540
||||||| | || ||||||||||||||| || | || ||||| || || ||||| ||||
Sbjct 2759037 TATCAATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCAT 2759096
Query 14541 AAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCAT 14600
| || || | || |||| | ||| || || | | || | ||| | | ||||||||
Sbjct 2759097 AGAAGCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCAT 2759156
Query 14601 TAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTT 14660
| || ||||||||| || || ||||| || || | || | |||||| | | | || |
Sbjct 2759157 TCACAATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCAT 2759216
Query 14661 CATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCC 14720
|| |||| | |||||| | | ||| ||||||||||||||||| || |||||||
Sbjct 2759217 TATCAGTGAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCC 2759276
Query 14721 AAAA 14724
| ||
Sbjct 2759277 AGAA 2759280
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482302393892880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |