Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 114 3e-20
>seq7155
Length=3116674
Score = 114 bits (126), Expect = 3e-20
Identities = 214/314 (68%), Gaps = 3/314 (1%)
Strand=Plus/Minus
Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978
|||| |||||||| |||||||| |||||||| ||||| || || || || ||||||
Sbjct 2758904 TTGCATTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGC 2758845
Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038
| ||||| | ||| | |||| || | || | |||||||| | ||||| | || |
Sbjct 2758844 TTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATG 2758785
Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098
| || |||||| | ||||| ||||| || |||| || | ||| | | | |||
Sbjct 2758784 AGGGACTTCATTGTGACTTCGCATGTTTGATGTTCCAACA---TTTAATACAAAAACCAA 2758728
Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158
| || | ||| ||||||| | ||||||| || |||||| || ||||| | |
Sbjct 2758727 GTAATGAGCGTATTGTTGAAATAATTTCTGAAGCTGTTAAAATTGAGCAGGAATTCTTAA 2758668
Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTG 102218
| | | |||| || || ||| | || ||||| ||||| | ||| | | || || |
Sbjct 2758667 CTGACGCTTTGCCGGTGAATTTAATCGGTATGAATTGCAAACTAATGTCCGATTATATCG 2758608
Query 102219 AATTTGTGGCAGAT 102232
|||||||||| |||
Sbjct 2758607 AATTTGTGGCTGAT 2758594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989493141963530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |