Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq7155 114 3e-20 >seq7155 Length=3116674 Score = 114 bits (126), Expect = 3e-20 Identities = 214/314 (68%), Gaps = 3/314 (1%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| |||||||| |||||||| |||||||| ||||| || || || || |||||| Sbjct 2758904 TTGCATTTGCTGCCGTTGAAGGTATCTTCTTCAGTGGCAGTTTTGCTTCGATCTTCTGGC 2758845 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 | ||||| | ||| | |||| || | || | |||||||| | ||||| | || | Sbjct 2758844 TTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAATTTCACGAGATG 2758785 Query 102039 AAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCAT 102098 | || |||||| | ||||| ||||| || |||| || | ||| | | | ||| Sbjct 2758784 AGGGACTTCATTGTGACTTCGCATGTTTGATGTTCCAACA---TTTAATACAAAAACCAA 2758728 Query 102099 CAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTCA 102158 | || | ||| ||||||| | ||||||| || |||||| || ||||| | | Sbjct 2758727 GTAATGAGCGTATTGTTGAAATAATTTCTGAAGCTGTTAAAATTGAGCAGGAATTCTTAA 2758668 Query 102159 CAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATTG 102218 | | | |||| || || ||| | || ||||| ||||| | ||| | | || || | Sbjct 2758667 CTGACGCTTTGCCGGTGAATTTAATCGGTATGAATTGCAAACTAATGTCCGATTATATCG 2758608 Query 102219 AATTTGTGGCAGAT 102232 |||||||||| ||| Sbjct 2758607 AATTTGTGGCTGAT 2758594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989493141963530