Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 271 7e-68
seq7084 206 2e-48
>seq7155
Length=3116674
Score = 271 bits (300), Expect = 7e-68
Identities = 482/694 (69%), Gaps = 17/694 (2%)
Strand=Plus/Plus
Query 11464 ATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGATCCAC 11523
||| || || ||||| ||||| | ||||||| ||||||||||| || | || |||
Sbjct 2758594 ATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCAC 2758653
Query 11524 CGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTAT--CGAC 11581
||| | ||| | || || || |||| || || ||||| || ||| ||||| | ||
Sbjct 2758654 CGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAAC 2758713
Query 11582 GTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCA 11641
||| || ||| |||| |||| |||||||| ||||| ||||| || || |||
Sbjct 2758714 A--ATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCA 2758771
Query 11642 CAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAAT 11701
||||| | || || |||| ||||||||||| |||||||| || || ||||| ||
Sbjct 2758772 CAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAA 2758831
Query 11702 CCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACA 11761
|| ||||| || | ||| || || | |||||| ||| ||||| || || || ||
Sbjct 2758832 CCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACG 2758891
Query 11762 GCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCTAG-ATATCCATTTTCTG 11818
|| |||||||| | ||| | ||| ||| | | || | | || | |||||
Sbjct 2758892 GCAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGAGGAAATCCAAGCAAGC 2758951
Query 11819 GCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAAATAA---ATGC 11875
|||||||| || || |||||| |||||| |||||||| || ||||| || |
Sbjct 2758952 GCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAATAAGTAATTC 2759011
Query 11876 ATTT-TTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAATG 11934
||| |||| | || | | ||||||||| ||||||| ||||||||||| |||||
Sbjct 2759012 CTTTGTTTCGAG----TCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATG 2759067
Query 11935 AATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACAC-TGTACAT 11993
| ||| ||||| || ||||||||||||||||| || |||||||||| ||| || || |
Sbjct 2759068 CACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTG-TCACTTGGACTT 2759126
Query 11994 CCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAATG 12053
|| | || | ||| ||| ||| ||||| |||||||||||| | || ||||| |
Sbjct 2759127 CCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGG 2759186
Query 12054 CTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAATCATCTAAAT 12113
||| | ||| ||||| | | ||| | | ||| | |||||||||| | ||
Sbjct 2759187 CTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATAT 2759246
Query 12114 CTTTTGATAAATCTACTTCTTCAACGGTCCAAAA 12147
|||| || | ||||||||| || || ||||| ||
Sbjct 2759247 CTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280
>seq7084
Length=1258986
Score = 206 bits (228), Expect = 2e-48
Identities = 453/673 (67%), Gaps = 7/673 (1%)
Strand=Plus/Plus
Query 36790 TCAACTGTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTT 36849
|| || || |||| ||||| ||||| || | ||| || | || ||||||||| || ||
Sbjct 1544 TCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGTC 1603
Query 36850 TTTAGCCCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTTTTGCGTATGTAGGATTA 36909
|| || || |||| ||||| ||||| ||| || || || | || | || | |
Sbjct 1604 TTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGCTCA 1663
Query 36910 TCTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATT 36969
| | | ||| | | || ||||| ||||| || || ||||| | || || ||||||
Sbjct 1664 GCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCATT 1723
Query 36970 TCTAAAATACATTTTTGAG-ATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATC 37028
| ||| | |||| | | ||||||||||| ||||| |||| | ||| | |
Sbjct 1724 T-TAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGCTG 1782
Query 37029 TGGTA---AATCTAAATGTTGAATAGAACCATTATGTAACACAATTGTATTCTTTATGTC 37085
||||| | || | |||||| || || || | | ||| |||| || || ||
Sbjct 1783 TGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCATATC 1842
Query 37086 ATTATTCCACATATTTCTACT-TATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144
|| || ||||| | | ||| |||| || | || | ||| |||||||||| ||||
Sbjct 1843 ATCATCCCACA-AACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTGAA 1901
Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204
| || || || | || | | |||||| ||||| ||| || ||||||| |||||||
Sbjct 1902 ATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTCAT 1961
Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264
| || | | ||||||| || || ||||| ||||| || || | || | || |
Sbjct 1962 TGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGC 2021
Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324
| |||||| || ||| ||| || | ||| |||||| ||| | ||| |||||
Sbjct 2022 GGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTCCAATTCCAAAGATCAGTTGGTG 2081
Query 37325 TCTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGTCT 37384
| || |||||| ||||| |||| |||||| ||||| | || ||| | ||||| || |
Sbjct 2082 TTTTATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTGAACCTTTATACGTTT 2141
Query 37385 CATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATATTG 37444
|||| | || || ||| ||||| ||||||||| | ||| | |||| |||| || || |
Sbjct 2142 CATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCTTCCAATGCGCCATAGTAAATAG 2201
Query 37445 TTTCGAAAATTTG 37457
||||||| |||||
Sbjct 2202 TTTCGAATATTTG 2214
Score = 196 bits (216), Expect = 5e-45
Identities = 572/874 (65%), Gaps = 8/874 (1%)
Strand=Plus/Plus
Query 37746 AATCTCTGTACAGAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTT 37805
||| || ||||| | |||||| | ||||||| || | ||| |||||| |||
Sbjct 2273 AATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTTGATTACTCTTTCG 2332
Query 37806 ATTACAAGAATCTTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAAT 37865
|||||||| ||||||||| | || || || || || || | ||| | || |||||
Sbjct 2333 ATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTTGCGATTCAATAAT 2392
Query 37866 AGATTTCCATAAACTTCTTGCTTTAACGATCGCTTTA--AtttttttCTTTGTTTCGTAT 37923
||| | |||| |||||| | || || | | ||| | ||| |||
Sbjct 2393 GCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCTTCCTG--TTCATAT 2450
Query 37924 TCTATATATAATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCAT 37983
| | |||||| || | || || | |||||||| || ||| || ||||| | | |
Sbjct 2451 TTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACCGGGACACTTGTGT 2510
Query 37984 GGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACC 38043
||||||||||| ||||| |||||||| |||||| |||| |||||||| |||||||| |
Sbjct 2511 GGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAATAGATCAGGTATC 2570
Query 38044 CATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTT-AA 38102
|| || ||| || |||||| ||| | || ||||| || || | | |||||| ||
Sbjct 2571 CACAAGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACC-AGTGTTTTTCTTCAA 2629
Query 38103 GCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGG 38162
| ||| ||||| |||||||| ||||||||||| | || || | | || || ||
Sbjct 2630 ATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGGCAAAGGCGCCGGG 2689
Query 38163 TCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGG 38222
| |||| | | || |||| | ||| | || | ||||| | | || ||||||||
Sbjct 2690 CCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACACTCGCAACATAGG 2749
Query 38223 TACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATT 38282
|| | |||||| ||||||| ||| |||| | || ||| || || || |||||
Sbjct 2750 CACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGCCTTTTGCGCGTATGCA 2809
Query 38283 ACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCATTG-TTTTAACG 38341
| || || || || || || ||| ||| || || || || ||||| | | |
Sbjct 2810 ATGTACGTTCAGACCAATACCGCCAGCAGATTTGGAAATCAATGCACATTGATGTGCAGA 2869
Query 38342 TATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTT 38401
| | ||| ||||| || || || ||| || | |||| ||| || |||| ||
Sbjct 2870 TGTGAAA-ATACCATCAATGGAATCGTCCACCATGGTCAGTAGAAAGCATGATGACAATT 2928
Query 38402 GAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCG 38461
| ||| ||| | || || | || ||||| |||||| | || | ||| |
Sbjct 2929 GCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCATGTGTAAAATAACGTTCGG 2988
Query 38462 ACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATA 38521
| | | || || ||||| ||| | |||| || || |||| || ||||| | | |
Sbjct 2989 AAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGCCATGTATACCGATGGCAA 3048
Query 38522 CCCTCATTAGCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACG 38581
| | ||||| |||||| ||||||| || | ||||| |||| || || | ||| |
Sbjct 3049 CACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCATTCAACTTTAGCAAATAGG 3108
Query 38582 ATTTTTCTAATGTTTTTATTCCAAAATAACTATA 38615
| ||| | |||||| | ||||||||| ||||
Sbjct 3109 AACGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468482831891040
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