Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq7155 280 2e-70 seq7084 259 7e-64 >seq7155 Length=3116674 Score = 280 bits (310), Expect = 2e-70 Identities = 493/712 (69%), Gaps = 7/712 (1%) Strand=Plus/Plus Query 49785 AATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTAT 49844 || ||| | ||| || |||||||| ||||| ||| | || |||||||| || || Sbjct 2758585 AAGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGAT 2758644 Query 49845 AAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTAT 49904 | || || || | ||| |||| | ||||| || ||||| || || || | || Sbjct 2758645 TAAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAAT 2758704 Query 49905 AATAG-ATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACAT 49962 || | | | ||| | | | ||| ||| || | |||||||| |||||||||||| Sbjct 2758705 TATTTCAACAATACGCT--CATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 2758762 Query 49963 GCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCG 50022 ||||| || || || || ||||| |||| ||||||||| |||||||| || | || Sbjct 2758763 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 2758822 Query 50023 GGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATT 50082 ||||||| ||||| || |||||||| || || || ||||| ||| |||||||| Sbjct 2758823 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATA 2758882 Query 50083 CCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG--CTGTCATGTA-TC 50139 ||||| || || ||||| |||| | | || ||| | |||| || | | | || Sbjct 2758883 CCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGAGGAAATC 2758942 Query 50140 CACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAG 50199 || | |||||||| ||||| ||||| |||||| || ||||| ||||| || Sbjct 2758943 CAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGAAT 2759002 Query 50200 AGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCC 50259 | || || ||| || || |||| ||| ||||| || || | ||||||||||| Sbjct 2759003 AAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCA 2759062 Query 50260 GAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGC 50319 ||||| | || || || || || |||||||| ||||| || | ||||| || | || Sbjct 2759063 GAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGG 2759122 Query 50320 ACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 50379 ||||| || || |||||| ||| |||||||||||| || || ||| || || ||| Sbjct 2759123 ACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAA 2759182 Query 50380 AACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTG 50439 || || || || ||| ||||||||| ||| || || || |||||||| Sbjct 2759183 AAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCC 2759242 Query 50440 ATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 50491 ||||||||||| | ||||||||| || |||||||| || ||||| ||||||| Sbjct 2759243 ATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 2759294 >seq7084 Length=1258986 Score = 259 bits (286), Expect = 7e-64 Identities = 603/892 (68%), Gaps = 18/892 (2%) Strand=Plus/Plus Query 79655 CCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTT 79714 ||| ||||| | ||||| || || | |||||||||||||| || || | ||| |||| Sbjct 2260 CCGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTT 2319 Query 79715 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCT 79774 ||||||||||| ||||| ||||| ||||| | ||| | || || || || || | | Sbjct 2320 GATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTT 2379 Query 79775 GAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGTATC-TCTT 79832 | ||||| ||||| ||| | | |||| | || |||||| | ||| | || | Sbjct 2380 GCGATTCAATAAT-GCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCT 2438 Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 | || || | |||| |||||| ||||||||| || ||||| || || | ||| || Sbjct 2439 TCCTGTT-CATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACC 2497 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 ||||| | || |||||||| | |||||| ||| |||| | | ||| ||||||||||| Sbjct 2498 GGGACACTTGTGTGGACACATTAGCGACCAGTCTTCATCGGCTTCTACACGTTTCATAAA 2557 Query 79953 GAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 80011 |||||||| ||||| | || ||| || | |||||||| | |||||| || || || | Sbjct 2558 TAGATCAGGTATCCACA-AGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTACCAG 2616 Query 80012 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 80071 | || || || | ||| | || | | |||||||| |||||| ||||| | ||| |||| Sbjct 2617 TGTTTTTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGATGG 2676 Query 80072 CCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 80131 | | | || || ||||| | || ||||| | || | || | ||||| | | Sbjct 2677 CAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGAACA 2736 Query 80132 CTCTCAACATTGGAATAATACCATTGGATGTACCATTGGT-CCCGGAGATATAGCTTCCA 80190 ||| |||||| || | | |||||| ||| | | ||| || |||| | | || | || Sbjct 2737 CTCGCAACATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAG-TGCCT 2795 Query 80191 CTGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 | || || || || ||| || ||||| || || || || ||| || || || Sbjct 2796 TTTGCGCGTATGCAATGTAC--GTT--CAGACCAATACCGCCAGCAGATTTGGAAATCAA 2851 Query 80247 TGCGCATCG-TTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTA 80305 ||| ||| | | | | | | | | || || || ||| ||| || | |||| | |||| Sbjct 2852 TGCACATTGATGTGCAGATGTGA-AAATACCATCAATGGAATCGTCCACCATGGTCAGTA 2910 Query 80306 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 80365 |||| || |||| ||| | | |||| | ||| || | || |||||||| | Sbjct 2911 GAAAGCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGCAT 2970 Query 80366 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT 80425 | ||||| | ||| || || | ||||| || || || |||| || || || Sbjct 2971 GTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTCGC 3030 Query 80426 GATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTAT 80485 ||| || || | || |||||||||||||| ||||| |||| ||||| || ||| || Sbjct 3031 CATGTATACCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCCAT 3090 Query 80486 TTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 80537 | | || | ||| || || ||| | ||||||||||||||||| || || Sbjct 3091 TCAACTTTAGCAAATAGGAACGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142 Score = 251 bits (278), Expect = 1e-61 Identities = 454/655 (69%), Gaps = 13/655 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||||||||||| | ||| ||||| ||||| || ||||| |||| ||||||||| Sbjct 1571 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 1630 Query 78799 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 78858 || ||| || || ||| ||| | || || || | || || || | || ||||| Sbjct 1631 TGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 1690 Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 ||||||||||| || || | |||||||||||||| || || || | ||| ||| Sbjct 1691 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTAATCGAGGTTTTCACGGAAATCTCC 1750 Query 78919 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGGA 78974 |||| |||||| || | |||| || | | | ||| | || || ||| || ||||| Sbjct 1751 CAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATGTTGTATGGA 1809 Query 78975 TCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAA 79034 || | | | ||||| |||| || || || |||| ||| || |||||||| Sbjct 1810 GCCGCGACTGGTTATAATATTATTTTTCATATCATCATCCCACAAACCCAACTCGGTTAG 1869 Query 79035 AACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093 | | | ||| || || |||| || ||||||||||| || || | || | || || | Sbjct 1870 ATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTAT 1928 Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153 |||||||| || || ||||| | || ||||| || |||| ||||||||||||||| | Sbjct 1929 AAATATTAGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAG 1988 Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGATCTGATTTTATCTT 79213 | |||||||| || || | || ||| || | | ||| | | | ||||| || | Sbjct 1989 CAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGATACCATGTTGCTTTATTTTCTCCT 2048 Query 79214 TTAGAGATTC---CCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTA 79270 | | |||| ||||| ||||||||||| || || ||| | ||||| |||| Sbjct 2049 TCA---ATTCGGTCCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTA 2105 Query 79271 GAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTA 79330 |||||| |||||| || ||| ||| | || |||||||| | || | ||||| |||| Sbjct 2106 AAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTA 2165 Query 79331 ATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATT 79385 |||| ||||| || || ||||| || || ||||| |||||||| || | || ||| Sbjct 2166 ATTCGCAACTGGCTTCCAATGCGCCATAGTAAATAGTTTCGAATATTTGCTGATT 2220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718204461072240