Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq7155 259 5e-64 >seq7155 Length=3116674 Score = 259 bits (286), Expect = 5e-64 Identities = 484/703 (69%), Gaps = 16/703 (2%) Strand=Plus/Plus Query 13698 AGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATT 13757 || || | |||||| | ||| || ||||| | ||||||| | ||||||||||| ||| Sbjct 2758586 AGCAAACGATCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATT 2758645 Query 13758 AGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATA 13817 | || || || | | ||||| ||||| | || || ||||| || | Sbjct 2758646 AAATTCACCGGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGA---A 2758702 Query 13818 ATAATTGTAATAAT---CTCATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACAC 13874 || ||| || ||| ||||||| || | | ||| ||||| || || ||||| Sbjct 2758703 ATTATTTCAACAATACGCTCATTACTTGGTTTTTGTATTAAATGTTGGAACATCAAACAT 2758762 Query 13875 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 13934 || || ||||||||||| |||||||||| ||| ||||| || |||||||| || ||| Sbjct 2758763 GCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCT 2758822 Query 13935 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAA--TGACCCGGAAAAGAATA 13992 ||||| || || ||||| || | ||| || || | |||||| || | | ||| ||| | Sbjct 2758823 GGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAA--GAAGA 2758880 Query 13993 TTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATA 14052 | || ||||| |||||||| || |||| ||||| ||||| ||| || || | Sbjct 2758881 TACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGAGGAAA 2758940 Query 14053 TCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAA 14112 |||| ||||| || | || || | | |||||| || |||||||| | Sbjct 2758941 TCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGGCATTGTCTCTATAGCATTGA 2759000 Query 14113 ATAAATA-TTCCTTCTCTTT--AGTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169 |||| || |||||| | ||| ||| ||| ||| ||||||||||| | || |||||||| Sbjct 2759001 ATAAGTAATTCCTT-TGTTTCGAGTCCTT--AATATATGTATCAATTAATATGCTATACA 2759057 Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACC 14229 ||||||| || | || ||||| || || ||||| ||||| ||||| | || || | | Sbjct 2759058 TTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCA 2759117 Query 14230 ATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTG 14289 ||| |||||| | | || | ||| | | ||||||||| || ||||||||| || | Sbjct 2759118 CTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGG 2759177 Query 14290 CAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAAT 14349 | ||||| || || | || | |||||| | | | || | || |||| | ||||| Sbjct 2759178 CGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAAT 2759237 Query 14350 CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAA 14392 | | ||| ||||||||||||||||| || |||||||| || Sbjct 2759238 CATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479685028364400