Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq7104 145 8e-30
seq3141 98.7 1e-15
>seq7104
Length=1453772
Score = 145 bits (160), Expect = 8e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || |||| ||| | ||| ||||||| |||||| || || || ||||||||||||
Sbjct 422164 GCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGA 422105
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| |||| |||||| ||||||||||| ||| |||| | |||||| ||||| || ||
Sbjct 422104 CAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGG 422045
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||||||||| ||| || ||| | | ||| | || || | ||||| ||
Sbjct 422044 GATTCCTTCTTTGTCTTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAAC 421985
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||||| ||||| || || ||||| ||||||||
Sbjct 421984 CTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937
>seq3141
Length=2848
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| |||| | ||| | |||||||| | |||||| ||||| || || || || ||
Sbjct 1571 GCCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTCAGC 1512
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| ||||| ||||| | ||| || || || | || ||||| || ||||| || ||
Sbjct 1511 CAATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGGCGG 1452
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||| || || |||||| || | ||||| | || |||| || || ||
Sbjct 1451 AATTCCTTCCTTATCTTGAATTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTCAAC 1392
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCT 143188
|||| ||| | ||||| || || | ||||||||||| |||||||| |||
Sbjct 1391 CTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCATTGCT 1340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506968984185120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |