Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq7071 87.8 1e-12 >seq7071 Length=1150481 Score = 87.8 bits (96), Expect = 1e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 24927 AACCAAAGCGCGTGTTGTTGCCACGGCTCGTCATCTTGCTCCCAGTTGTCCAAACCGCCG 24986 ||||| ||||| || |||| ||| || || ||||| | ||||| | | | ||| | Sbjct 758921 AACCAGAGCGCATGCTGTTCCCATGGTTCATCATCATCATCCCAATCCTTGAGACCACAA 758980 Query 24987 TCGCAGTAAAAACATTTGACTTTGTCGCTACGGCCGGTGTAAAAGAAGCCAGCTTCTGCA 25046 ||||| ||| || || || || | | |||||| || ||||||||||| || || Sbjct 758981 CCGCAGCTAAAGCACTTAACGCGATCACCAGTGCCGGTATAGAAGAAGCCAGCATCGGCT 759040 Query 25047 AGTTTTTCGGGCCGTTGCTTCAAACCGCGTGGCCACTCTGTAAATGTGCGCAAACGCGCA 25106 | || | || |||||||||| ||||||||| |||| ||| | || || || || Sbjct 759041 AATTCCTTTGGACGTTGCTTCATGTTGCGTGGCCATTCTGCAAACGAACGTAAGCGTGCC 759100 Query 25107 GCTTCTATCGCATATT 25122 ||||| || ||||||| Sbjct 759101 GCTTCGATGGCATATT 759116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414536593025404