Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq7155 185 7e-42
>seq7155
Length=3116674
Score = 185 bits (204), Expect = 7e-42
Identities = 470/705 (67%), Gaps = 10/705 (1%)
Strand=Plus/Plus
Query 12986 TCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACA 13045
||||| ||||| || || || | ||||| | || ||||| || ||||| || ||
Sbjct 2758595 TCAGCCACAAATTCGATATAATCGGACATTAGTTTGCAATTCATACCGATTAAATTCACC 2758654
Query 13046 GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTT 13105
|||| ||| || ||||| || | | || || | ||| ||||| || ||| ||
Sbjct 2758655 GGCAAAGCGTCAGTTAAGAATTCCTGCTCAATTTTAACAGCTTCAGAAATTATTTCAACA 2758714
Query 13106 ATTACGTTCTCTAATGGAGGATTTGA--TAGATGCTTAAACATCATACATGCAAAATCAC 13163
|| ||| || || | | | |||| || ||| | ||||||| |||||| || ||||
Sbjct 2758715 AT-ACGCTCATTACTTG-GTTTTTGTATTAAATGTTGGAACATCAAACATGCGAAGTCAC 2758772
Query 13164 AGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCC 13223
| || | ||| ||||||| ||||| || || |||||||| | || ||||| | |
Sbjct 2758773 AATGAAGTCCCTCATCTCGTGAAATTAGTTCATTGGAAAATGTCAAGCCTGGCATTAAAC 2758832
Query 13224 CTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTG 13283
| ||||| |||| ||| || || | |||||| || || || || |||||||| |
Sbjct 2758833 CACGTTTCTTAAGCCAGAAGATCGAAGCAAAACTGCCACTGAAGAAGATACCTTCAACGG 2758892
Query 13284 CTGCAAACGCTATCAACCTTTCACCATACGTA-CT-ATTTTTACTCTCTATCCACTTTCT 13341
| ||||| || || | | ||||||| | | || | || | |||||
Sbjct 2758893 CAGCAAATGCAATTACACGTTCACCAAAGTTGGCTGACTTCGAGGAA--ATCCAAGCAAG 2758950
Query 13342 GGCCCAGTTTGCTTTTTGTTTAACG-CAGTTCATATTTTCTATTGCGTTAAATAAATAAt 13400
||||| | ||| || | || ||| ||| ||| | ||||| || || ||||| ||||
Sbjct 2758951 CGCCCAATCTGCCTTGCGCTTTACGGCAGG-CATTGTCTCTATAGCATTGAATAAGTAAT 2759009
Query 13401 ttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAA 13460
| ||| || ||| |||||| ||||| || |||| |||||||||||| ||||| |
Sbjct 2759010 TCCTTTGTTTCGAGTCCTTAATATATGTATCAATTAATATGCTATACATTTCAGAATGCA 2759069
Query 13461 TATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGG 13520
||| |||||||| ||||| || ||||| || || | ||||||| || || |||||
Sbjct 2759070 CATTCTCCATCGCAATTTGAAATCCATAGAAGCAACGTGCCTCTGTCACTTGGACTTCCT 2759129
Query 13521 AGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAA 13580
| | || | ||| ||| ||||| || || || || ||| || || ||||| || |
Sbjct 2759130 GGCAGAAACGTTCAACTACATTTTCATTCACAATACCATCAGATGCGGCGAAAAAGGCTA 2759189
Query 13581 GTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTT 13640
| ||| |||||| | | ||| || || | | | |||||| | |||||
Sbjct 2759190 ACACGTGTGAAATAAAATGTCGTTCATTATCAGTGAGACGTGCCCAATCATCCATATCTT 2759249
Query 13641 TTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCT 13685
| || | |||||| ||||| || ||||| || || || | ||||
Sbjct 2759250 TAGAAAGATCTACTTCCTCTACTGTCCAGAACGATGCTTCTGCCT 2759294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430944759882732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |