Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_005905.1
Length=86462
Score E
Sequences producing significant alignments: (Bits) Value
seq6648 140 2e-28
>seq6648
Length=89737
Score = 140 bits (154), Expect = 2e-28
Identities = 193/270 (71%), Gaps = 0/270 (0%)
Strand=Plus/Minus
Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934
||||| ||||| | ||||| || || ||||| || |||||||||||||||||||| |||
Sbjct 18049 GGTGTTCATTTCGTTATGGCAGATGGAGGGTTTTCAGTTGAGGGTCAAGAAAATATCCAA 17990
Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994
||||| | || || | | ||||||||||||||||| || ||| | | ||| | |||
Sbjct 17989 GAAATTCTTTCTAAGCAACTTTATTTGTGTCAATGTTTGATGGCACTAAAAATCCTTCGA 17930
Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054
|| || || | || |||||| || ||| |||| || || |||||| || ||
Sbjct 17929 GTTAACGGCAGTTTTCTTTGCAAATTATTTGATTTATTCACGCCATTTAGTATAGGATTG 17870
Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114
| | ||| ||||||| || |||| ||| || | ||| || ||||| || ||
Sbjct 17869 ATATTTTTAATGTATAAATGTTTTGATCAGATATCTATATTGAAACCTAATAGTAGTAGA 17810
Query 4115 CCGGCCAATTCTGAAAGATATTTGGTGTGT 4144
||||| ||||| || ||||||| || |||
Sbjct 17809 CCGGCGAATTCAGAGCGATATTTAGTTTGT 17780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 276529447018498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |