Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_005905.1 Length=86462 Score E Sequences producing significant alignments: (Bits) Value seq6648 140 2e-28 >seq6648 Length=89737 Score = 140 bits (154), Expect = 2e-28 Identities = 193/270 (71%), Gaps = 0/270 (0%) Strand=Plus/Minus Query 3875 GGTGTACATTTTATGATGGCTGACGGTGGGTTCTCGGTTGAGGGTCAAGAAAATATGCAA 3934 ||||| ||||| | ||||| || || ||||| || |||||||||||||||||||| ||| Sbjct 18049 GGTGTTCATTTCGTTATGGCAGATGGAGGGTTTTCAGTTGAGGGTCAAGAAAATATCCAA 17990 Query 3935 GAAATGTTATCGAAAAAGATGTATTTGTGTCAATGTTTAATTGCATTGATGATCATACGA 3994 ||||| | || || | | ||||||||||||||||| || ||| | | ||| | ||| Sbjct 17989 GAAATTCTTTCTAAGCAACTTTATTTGTGTCAATGTTTGATGGCACTAAAAATCCTTCGA 17930 Query 3995 ATTGGTGGTCATTGTGTTATCAAATTTTTCGATATATTTACACCTTTTAGTGCTGGTTTA 4054 || || || | || |||||| || ||| |||| || || |||||| || || Sbjct 17929 GTTAACGGCAGTTTTCTTTGCAAATTATTTGATTTATTCACGCCATTTAGTATAGGATTG 17870 Query 4055 GTGTATTTGATGTATAGATCTTTTAATCGTATTTGTATTTTCAAACCACATTCATCGCGA 4114 | | ||| ||||||| || |||| ||| || | ||| || ||||| || || Sbjct 17869 ATATTTTTAATGTATAAATGTTTTGATCAGATATCTATATTGAAACCTAATAGTAGTAGA 17810 Query 4115 CCGGCCAATTCTGAAAGATATTTGGTGTGT 4144 ||||| ||||| || ||||||| || ||| Sbjct 17809 CCGGCGAATTCAGAGCGATATTTAGTTTGT 17780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 276529447018498