Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq7134 129 3e-25
seq7106 118 6e-22
seq6915 113 2e-20
>seq7134
Length=2137532
Score = 129 bits (142), Expect = 3e-25
Identities = 83/90 (92%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 11441 AATAAAAAA-TCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
||||||||| | |||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 956325 AATAAAAAACTGAAATTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCA 956384
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||| ||||||||||||||||||||
Sbjct 956385 CGACGCTCTAACCAACTGAGCTAATGGGCC 956414
>seq7106
Length=1862430
Score = 118 bits (130), Expect = 6e-22
Identities = 81/92 (88%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 11438 ATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
||||| ||| | | | ||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1673191 ATTAAAAAATACTTGAGTTGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAG 1673250
Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||||||| ||||||||||||||||||||
Sbjct 1673251 CACGACGCTCTAACCAACTGAGCTAATGGGCC 1673282
>seq6915
Length=388549
Score = 113 bits (124), Expect = 2e-20
Identities = 69/74 (93%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 382475 TGGCCCATGAGGGGATCGAACCCGCGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 382534
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 382535 TGAGCTAATGGGCC 382548
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261468362502616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |