Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq7098 116 6e-22 >seq7098 Length=1532034 Score = 116 bits (128), Expect = 6e-22 Identities = 94/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 || || |||||||||||||| |||||||| |||||||| || ||| ||||||| |||||| Sbjct 943436 CTACGTGATAACATCCAAGGTATCACCAAACCAGCTATTCGCCGTTTGGCTCGCCGTGGT 943377 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 || || || ||| | ||||||||| | |||||||| | |||| ||| |||||| Sbjct 943376 GGTGTAAAACGTATTTCTGGATTGATTTATGAAGAAACGCGTGGTGTATTGAAG 943323 Score = 87.8 bits (96), Expect = 3e-13 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641 ||| || | ||||||| || ||| ||||| ||||| || ||||| || |||||| | || Sbjct 943250 CGTAATTCGTGATGCTGTCACCTACACCGAACACGCCAAGCGTAAAACGGTCACCGCTAT 943191 Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | || || || |||||||||||||| || | | || |||||||| ||||| Sbjct 943190 GGATGTTGTATACGCCTTGAAACGTCAAGGTCGCACCCTGTACGGTTTTGGCGGTTAA 943133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79068648076038