Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq7098 116 6e-22
>seq7098
Length=1532034
Score = 116 bits (128), Expect = 6e-22
Identities = 94/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513
|| || |||||||||||||| |||||||| |||||||| || ||| ||||||| ||||||
Sbjct 943436 CTACGTGATAACATCCAAGGTATCACCAAACCAGCTATTCGCCGTTTGGCTCGCCGTGGT 943377
Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
|| || || ||| | ||||||||| | |||||||| | |||| ||| ||||||
Sbjct 943376 GGTGTAAAACGTATTTCTGGATTGATTTATGAAGAAACGCGTGGTGTATTGAAG 943323
Score = 87.8 bits (96), Expect = 3e-13
Identities = 90/118 (76%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 16582 CGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCAT 16641
||| || | ||||||| || ||| ||||| ||||| || ||||| || |||||| | ||
Sbjct 943250 CGTAATTCGTGATGCTGTCACCTACACCGAACACGCCAAGCGTAAAACGGTCACCGCTAT 943191
Query 16642 GGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
|||| | || || || |||||||||||||| || | | || |||||||| |||||
Sbjct 943190 GGATGTTGTATACGCCTTGAAACGTCAAGGTCGCACCCTGTACGGTTTTGGCGGTTAA 943133
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79068648076038
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |