Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_006646.1 Length=31972 Score E Sequences producing significant alignments: (Bits) Value seq6360 80.6 5e-11 >seq6360 Length=35628 Score = 80.6 bits (88), Expect = 5e-11 Identities = 90/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Plus Query 22909 TTTTCAAACAAAGGTTCATTTGGAATAACTTTTTAATGACTTTACCGATCGATTCCAAAA 22968 |||||||| | | || || |||||||||| | || | || || ||||| |||||| || Sbjct 6596 TTTTCAAA-ACTGTTTTTTTGGGAATAACTTCTAAACGGCTATATCGATCAATTCCATAA 6654 Query 22969 ACTAATCAGCCCTTAACCTCGAAAAACCACGTCGATTGCCACCGGCCCGGCCAGAATCG 23027 |||||||||| || |||||| ||||| ||| ||||| || | || || || ||||| Sbjct 6655 ACTAATCAGCACTCAACCTCACAAAACTACGCCGATTACCGCAAACCGGGTCAAAATCG 6713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 102180104116328