Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_006651.1
Length=19161
Score E
Sequences producing significant alignments: (Bits) Value
seq7008 91.5 2e-14
seq7135 86.0 8e-13
seq6934 86.0 8e-13
seq5173 82.4 9e-12
>seq7008
Length=767233
Score = 91.5 bits (100), Expect = 2e-14
Identities = 81/100 (81%), Gaps = 1/100 (1%)
Strand=Plus/Minus
Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396
|||||| | |||||||||||| |||| || |||| || ||||| ||||||||| || ||
Sbjct 759995 GTTTTTCAAAGGGTAGAAAAGTATGGATAAGTTTCGGCAAAATCTAAAGGGGTC-GGTTC 759937
Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATAGTT 3436
|||| |||| ||||||| || ||| |||| || ||||||
Sbjct 759936 AAAAGTGGTCGATTTGGTATGTAATACCCCGTATATAGTT 759897
>seq7135
Length=2243651
Score = 86.0 bits (94), Expect = 8e-13
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Plus
Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396
|||||| | ||||||||||||||||| | |||| || ||||| ||||||||| || |
Sbjct 2030017 GTTTTTCAAAGGGTAGAAAAGGATGGAGTAGTTTCGGCAAAATCTAAAGGGGTCGGGTTT 2030076
Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433
|||| |||| ||||| | | |||| ||||||| |||
Sbjct 2030077 AAAAGTGGTCGATTTAGTATAGAATACCCCATATATA 2030113
>seq6934
Length=405937
Score = 86.0 bits (94), Expect = 8e-13
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 3339 TTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCAA 3398
|||| | ||||||||||||||| | || ||||||| ||||| |||| |||| || ||||
Sbjct 216399 TTTTCACAGGGTAGAAAAGGATAGATAAGTTTCAGCAAAATCTAAAGCGGTCGGGTTCAA 216340
Query 3399 AAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433
|| ||| ||||||| || ||| ||||||| |||
Sbjct 216339 AAGTGGACGATTTGGTATGAAATACCCCATATATA 216305
>seq5173
Length=14334
Score = 82.4 bits (90), Expect = 9e-12
Identities = 69/85 (81%), Gaps = 0/85 (0%)
Strand=Plus/Minus
Query 3349 GTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCAAAAATGGTTGA 3408
|||||||||||||| || ||||||| ||| | |||||| || || |||||| |||| ||
Sbjct 2407 GTAGAAAAGGATGGATAAGTTTCAGCAAAACCTAAAGGGATCGGGTTCAAAAGTGGTCGA 2348
Query 3409 TTTGGCGTGGAATGCCCCATAGATA 3433
||||| |||||| || |||| |||
Sbjct 2347 TTTGGTATGGAATACCTCATATATA 2323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 61191729424392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |