Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_006651.1 Length=19161 Score E Sequences producing significant alignments: (Bits) Value seq7008 91.5 2e-14 seq7135 86.0 8e-13 seq6934 86.0 8e-13 seq5173 82.4 9e-12 >seq7008 Length=767233 Score = 91.5 bits (100), Expect = 2e-14 Identities = 81/100 (81%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396 |||||| | |||||||||||| |||| || |||| || ||||| ||||||||| || || Sbjct 759995 GTTTTTCAAAGGGTAGAAAAGTATGGATAAGTTTCGGCAAAATCTAAAGGGGTC-GGTTC 759937 Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATAGTT 3436 |||| |||| ||||||| || ||| |||| || |||||| Sbjct 759936 AAAAGTGGTCGATTTGGTATGTAATACCCCGTATATAGTT 759897 >seq7135 Length=2243651 Score = 86.0 bits (94), Expect = 8e-13 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 3337 GTTTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTC 3396 |||||| | ||||||||||||||||| | |||| || ||||| ||||||||| || | Sbjct 2030017 GTTTTTCAAAGGGTAGAAAAGGATGGAGTAGTTTCGGCAAAATCTAAAGGGGTCGGGTTT 2030076 Query 3397 AAAAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 |||| |||| ||||| | | |||| ||||||| ||| Sbjct 2030077 AAAAGTGGTCGATTTAGTATAGAATACCCCATATATA 2030113 >seq6934 Length=405937 Score = 86.0 bits (94), Expect = 8e-13 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 3339 TTTTGATAGGGTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCAA 3398 |||| | ||||||||||||||| | || ||||||| ||||| |||| |||| || |||| Sbjct 216399 TTTTCACAGGGTAGAAAAGGATAGATAAGTTTCAGCAAAATCTAAAGCGGTCGGGTTCAA 216340 Query 3399 AAATGGTTGATTTGGCGTGGAATGCCCCATAGATA 3433 || ||| ||||||| || ||| ||||||| ||| Sbjct 216339 AAGTGGACGATTTGGTATGAAATACCCCATATATA 216305 >seq5173 Length=14334 Score = 82.4 bits (90), Expect = 9e-12 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 3349 GTAGAAAAGGATGGTAAACTTTCAGCCAAATCAAAAGGGGTCAGGGTCAAAAATGGTTGA 3408 |||||||||||||| || ||||||| ||| | |||||| || || |||||| |||| || Sbjct 2407 GTAGAAAAGGATGGATAAGTTTCAGCAAAACCTAAAGGGATCGGGTTCAAAAGTGGTCGA 2348 Query 3409 TTTGGCGTGGAATGCCCCATAGATA 3433 ||||| |||||| || |||| ||| Sbjct 2347 TTTGGTATGGAATACCTCATATATA 2323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 61191729424392