Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq5957 86.0 1e-12 >seq5957 Length=14136 Score = 86.0 bits (94), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 4480 AATTATGTTATTCACTATAAAAATTTGAAACAATGT-TTAGATTTAGGTTTAGTTCTTAA 4538 || ||| | ||||| ||||||| || |||| ||| ||| | | ||| | || | || Sbjct 11484 AAATATATAATTCATTATAAAAGATTACAACAGTGTATTAAACAT-GGTCTTGTATTGAA 11426 Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598 |||||| || | | | ||||| | ||||| || ||| | ||| |||||| ||| Sbjct 11425 GAAAATTCATAGAATTCTACAATTTAATCAATCGGATTGGTTAAAAAAATATATTGATTT 11366 Query 4599 AAATACCG--CATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTA 4656 ||||| ||| ||| | |||| ||| |||| ||| |||| |||| ||||||| Sbjct 11365 AAATAATTATCATA--GAACATTAGCAGCAAATAAGTTTGAAGAAAATTTTTTTAAATTA 11308 Query 4657 ATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTA 4695 | ||||||||||| | ||| || || ||||| |||||| Sbjct 11307 TTAAATAATGCGGTGTATGGGAAAACTATGGAAAATGTA 11269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97966062745964