Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_006658.1
Length=30655
Score E
Sequences producing significant alignments: (Bits) Value
seq5957 86.0 1e-12
>seq5957
Length=14136
Score = 86.0 bits (94), Expect = 1e-12
Identities = 153/219 (70%), Gaps = 6/219 (3%)
Strand=Plus/Minus
Query 4480 AATTATGTTATTCACTATAAAAATTTGAAACAATGT-TTAGATTTAGGTTTAGTTCTTAA 4538
|| ||| | ||||| ||||||| || |||| ||| ||| | | ||| | || | ||
Sbjct 11484 AAATATATAATTCATTATAAAAGATTACAACAGTGTATTAAACAT-GGTCTTGTATTGAA 11426
Query 4539 GAAAATACACCTAGTCTTGAAATTTGAGCAATCAGACTGGCTCAAATCATATATCGATAA 4598
|||||| || | | | ||||| | ||||| || ||| | ||| |||||| |||
Sbjct 11425 GAAAATTCATAGAATTCTACAATTTAATCAATCGGATTGGTTAAAAAAATATATTGATTT 11366
Query 4599 AAATACCG--CATGCCGAAAACTAGCTAAGAATGAGTTCGaaaaaaaCTTTTATAAATTA 4656
||||| ||| ||| | |||| ||| |||| ||| |||| |||| |||||||
Sbjct 11365 AAATAATTATCATA--GAACATTAGCAGCAAATAAGTTTGAAGAAAATTTTTTTAAATTA 11308
Query 4657 ATGAATAATGCGGTTTTTGGAAAGACGATGGAGAATGTA 4695
| ||||||||||| | ||| || || ||||| ||||||
Sbjct 11307 TTAAATAATGCGGTGTATGGGAAAACTATGGAAAATGTA 11269
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 97966062745964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |