Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq7156 102 8e-17 seq7143 102 8e-17 seq7084 87.8 2e-12 >seq7156 Length=3407544 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||||||||| | || || ||||| |||||||| || | |||||| | || | || | Sbjct 1526738 CAAAATGCAGATTTTCGTCAAAACCTTAACTGGTAAGACCATCACCTTAGAGGTCGAGCC 1526679 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||||||||| | |||||| || || |||||||| || || || || || Sbjct 1526678 TTCTGACACCATCGAAAATGTCAAAGCTAAAATCCAAGACAAAGAGGGTATCCCCCCAGA 1526619 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 |||||| | | || | || ||| |||||| | ||||||| | | | | | |||||| Sbjct 1526618 TCAACAGCGTTTGATCTTCGCCGGAAAACAATTGGAAGATGGTCGCACCTTGTCCGACTA 1526559 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||| ||||| || || || ||||| |||| ||| | ||| | || || Sbjct 1526558 CAACATCCAAAAGGAGTCAACCCTCCATTTGGTTCTGCGTCTTCGTGGTGG 1526508 >seq7143 Length=2789641 Score = 102 bits (112), Expect = 8e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 || |||||||| || |||||||| ||||| | ||| || ||| || ||||| ||| Sbjct 1275001 ACACATGATGACCTCTGGAATGCAGCTCAACTACAACTGGTTCGTGAAGGCAAAATGCAC 1275060 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAAACTCCCGAGCAG 71791 |||| || || | ||| |||||||||||||| || || ||| || || || | || || Sbjct 1275061 GGATTTCTTCGTAAGTATTGGGCCAAAAAGATACTGGAATGG--TCCAAGTCACCAGAAG 1275118 Query 71792 --GCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGTCGCGATCCTA 71849 ||||| || | | |||||| |||| || | ||| ||| | || || | ||| | | Sbjct 1275119 CTGCGCTAGAAACTGCAATTTATTTAAATGACAAATATAGTTTAGATGGCAGAGATTCCA 1275178 Query 71850 ACGGTTATGTCGGT 71863 |||||||||| ||| Sbjct 1275179 ACGGTTATGTGGGT 1275192 >seq7084 Length=1258986 Score = 87.8 bits (96), Expect = 2e-12 Identities = 437/681 (64%), Gaps = 39/681 (6%) Strand=Plus/Plus Query 147113 CACGGTGAATTGAATCGTGTTTGCTGCGGGTTTGGTTCTCAAATAGTACATGCCCGTTTT 147172 ||| || ||||| || | ||||| || ||||| || | |||||| ||||||||||| || Sbjct 1546 CACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCCGTCTT 1605 Query 147173 TAAACCCTTTTCCCAAGAATAGTCGTGAATGGATGATAAAACTTT--ATAGGTTGGATTG 147230 | ||| | ||| ||| || || || | || ||| |||| | || | Sbjct 1606 GAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGT--AAGCTTGCCATAGTTGGGCTCA 1663 Query 147231 GCCACAAAAAGATTGAGCGATTGGCTCTGATCGATGTAAGGTCCCCGCTCTGCGGCCATG 147290 ||||| | |||| ||| || |||||||||||| | | || || ||||| ||||| Sbjct 1664 GCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCCATT 1723 Query 147291 TCCAACACTACTTTTTGTTTAATTTCCCAAGCGGTCTTGAAGAG--CGCCTTGATATTGT 147348 | | | ||| ||| |||||| | || ||| | || ||| | || | | Sbjct 1724 TTAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGT--ATGTGCT 1781 Query 147349 GTGGAATTTCATCAATATTTTGTACAGATCCGT---TGTTTTTAATAATTTTTATCATGA 147405 |||| || ||||||| ||||| || ||| || || ||||| | ||| |||| Sbjct 1782 GTGGTATGGATTCAATATGTTGTATGGAGCCGCGACTGGTTATAATATTATTTTTCATAT 1841 Query 147406 TATCTGTCGAATATACGTTGGTGTCTACGAGTTTA--TCG----ACGAGATGCTGATTGA 147459 ||| || | | || | || | ||| ||| || || || ||||| | Sbjct 1842 CATCA-TCCCACAAACC-------CAACTCGGTTAGATCGCGTAACAAG-TGATGATTTA 1892 Query 147460 CCACTTGATACTCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGA 147519 | |||||| | || ||||| || || | ||| || | |||| ||| |||| || | Sbjct 1893 CAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAA 1952 Query 147520 ACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATA 147579 | ||||| ||||| || | ||| || ||||| | || || |||||| |||| || | Sbjct 1953 ATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCA 2012 Query 147580 ATGAATTGCGTAAGCCGTGCATAGCCAT---TTCTCGCTTAAGCTCGTCCCAGTTCCAAA 147636 | || ||||| | || || | || | ||||| ||| | ||| ||| ||||||| Sbjct 2013 AAGAGTTGCGGATACCATG--TTGCTTTATTTTCTC-CTTCAATTCGGTCCAATTCCAAA 2069 Query 147637 GATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGC 147696 ||||| | | | ||| ||| ||||| ||| ||||||||| || ||| | || Sbjct 2070 GATCAGTTGGT--GTTT-TATCCCACATGTCATACTGTAAAATACCCTTACTAACGGGTG 2126 Query 147697 TTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AG 147754 || | || | || || || || | || ||||| |||| ||| | ||| | Sbjct 2127 AACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTAATTCGCAACT--GGCTTCCAA 2184 Query 147755 TGCACCATAATAAATAGTTTC 147775 ||| ||||| ||||||||||| Sbjct 2185 TGCGCCATAGTAAATAGTTTC 2205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478619523815520