Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 237 4e-57
seq7133 167 6e-36
seq7155 96.9 9e-15
>seq7084
Length=1258986
Score = 237 bits (262), Expect = 4e-57
Identities = 558/834 (67%), Gaps = 14/834 (2%)
Strand=Plus/Minus
Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492
||||| | |||||||| || || ||||||||||||||||||||||| || ||||| |||
Sbjct 3091 AATGGCAAAATTGTTGAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGTATACAT 3032
Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACG 363552
|| || | ||||| || || ||||| || || | || | ||| || ||
Sbjct 3031 GGCGAAGACATCGATGCAGCAATCGAAACTTACAACTTGCTTTCCGAACGTTATTTTACA 2972
Query 363553 CACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTT 363612
|| || | ||||| | | | ||||| ||| | || || |||| || ||||||
Sbjct 2971 CATGCTTCTCCAACGCTTTTCGCTGCTGCCACTAAGCAGCCGCAATTGTCATCATGCTTT 2912
Query 363613 CTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA--ATTGTG 363670
|| || | ||| |||||||||||| || ||||| ||| ||| || | | | ||||
Sbjct 2911 CTACTGACCATGGTGGACGATTCCATTGATGGTAT-TTTCACAT-CTGCACATCAATGTG 2854
Query 363671 CTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCC-ACAATG--TTCGTGCAC 363727
| | |||||||| ||| ||||| |||||| | || | ||| || | || |||
Sbjct 2853 CATTGATTTCCAAATCTGCTGGCGGTATTGGTCT---GAACGTACATTGCATACGCGCAA 2797
Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787
| || | ||| || ||| | | || ||||| |||| || ||| | || |
Sbjct 2796 AAGGCACTGCAATTGCGGGTACAAATAGCAAATCAAATGGTTTGGTGCCTATGTTGCGAG 2737
Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847
|||| | |||| || | || || || || || | || || || || || ||||
Sbjct 2736 TGTTCAATAATATAGCACGCTATGTGGATCAAGGGTGCGGTAAACGGCCCGGCGCCTTTG 2677
Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907
| || || ||||| || ||||| |||||||| || ||| | || | ||||||||
Sbjct 2676 CCATCTACCTCGAACCATGGCATGCTGATATTTTCGAATTTTTGGATTTGAAGAAAAACA 2617
Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967
| || ||||| || ||||| | ||| |||||||||| | ||| | |||| | |
Sbjct 2616 CTGGTAAAGAAGAGCATCGTGCCAGAGATTTGTTCTATGCCTTGTGGATACCTGATCTAT 2557
Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAG 364027
||||||| || || || || | | | | ||||| || | || |||||| | ||||| |
Sbjct 2556 TTATGAAACGTGTAGAAGCCGATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCCCG 2497
Query 364028 GTCTTTCCGATGTATGGGGTGACGACTATG--TTGCTCTATACGAAAAGTATGAATCGGA 364085
|| | || ||||||||||| || | | | | ||| |||| |||||| |||
Sbjct 2496 GTTTACATGAAGTATGGGGTGAAGAGTTCGAAAAGTTATATCTGAAA--TATGAACAGGA 2439
Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145
||| || ||||| ||| ||||| | || |||||| ||| || || |||||
Sbjct 2438 AGGACGTGCCAATAAGAAAATAAAAGCACAAAGTCTTTGGTTTAGCATTATTGAATCGCA 2379
Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205
| ||||| || ||||| || |||||||| |||||| | || || || ||| || ||
Sbjct 2378 AGTGGAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCA 2319
Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259
||| | |||| |||||| || || || |||||||||| ||| | |||||
Sbjct 2318 ACAGAATGTTGGCACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATA 2265
Score = 159 bits (176), Expect = 9e-34
Identities = 306/443 (69%), Gaps = 6/443 (1%)
Strand=Plus/Minus
Query 364717 AAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCA 364776
||| | ||||||| |||||||| | | ||||||||||| || ||||| |||||
Sbjct 2037 AAGCAACATGGTATCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACTGCTTCAACTGCT 1978
Query 364777 CAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGG 364836
|| || | || ||||| |||| || ||||||| || ||| ||||| |||| ||
Sbjct 1977 CAAATTATGGGCAACAATGAGTCATTTGAACCGTACACTTCTAATATTTATACACGTCGT 1918
Query 364837 GTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAG-GATCTTTCCGACCG 364895
|| ||||| || ||||||| || || ||| | || | || | | ||||| ||||
Sbjct 1917 GTGCTTTCGGGTGAATTTCAAGTTGTAAATCATCACTT-GTTACGCGATCTAACCGAGTT 1859
Query 364896 CGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAA 364955
|| |||||| ||| ||||| || |||| || || | || || | || |
Sbjct 1858 GGGTTTGTGGGATGATGATATGAAAAATAATATTATAACCAGTCGCGGCTCCATACAACA 1799
Query 364956 CATTCCAGGATTTCCAGAAGATCTGAAGCC-TATTTACAAAACCGTATGGGAAATTTCCA 365014
||| | | ||| | | | | || | | |||||||| || ||||| ||||||
Sbjct 1798 TATTGAATCCATACCACAGCACAT-ACGCGATCTATACAAAACTGTTTGGGAGATTTCCG 1740
Query 365015 TGCGAACTCTC-ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073
|| ||| ||| ||| | ||||| || ||||||||||| || ||| |||||| ||||||
Sbjct 1739 TGAAAAC-CTCGATTAAAATGGCTGCAGATCGCGGTGCATTCATCGATCAGAGTCAGTCG 1681
Query 365074 TTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133
|| ||| || | || || |||| | || | ||||||||| || || |||||||||||
Sbjct 1680 TTCAACATACACGTGGCTGAGCCCAACTATGGCAAGCTTACTTCTATACATTTCTACGGC 1621
Query 365134 TGGAAATCCGGTCTTAAGACAGG 365156
||||| | ||||| ||||| ||
Sbjct 1620 TGGAAGGCAGGTCTCAAGACGGG 1598
>seq7133
Length=2056560
Score = 167 bits (184), Expect = 6e-36
Identities = 421/635 (66%), Gaps = 4/635 (1%)
Strand=Plus/Plus
Query 111290 AATGCGTTTTAATCTGTCAACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAA 111349
|||||| || |||| || | ||||||| | || || ||||||||| || ||||
Sbjct 1568630 AATGCGGTTCGATCTCCGAAATAGTTTTCCATTACTAACTACAAAGCGAGTATTTTGGCG 1568689
Query 111350 GGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGC 111409
| | | |||||| | ||||||||| ||| || | ||| | || || ||||
Sbjct 1568690 TGCTGTCGCTGAAGAATTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCA 1568749
Query 111410 AGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGG 111469
|| ||||||| | | || ||||||||||| | || || || |||| | ||
Sbjct 1568750 AGAAAAAAATATTCACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGCGG 1568809
Query 111470 TCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTT 111529
|| ||| | || ||||||||||| || |||||||| || ||||| ||||| || ||
Sbjct 1568810 ATTTTCCGATAGGGAGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTT 1568869
Query 111530 TGGTGCAGACTACAAAACCATGCAC-GACTCATATGATTCACAGGGAACTGATCAATTAC 111588
||| || | |||| || | |||| ||| || | |||| | |||||| | |
Sbjct 1568870 TGGGGCCAAGTACAGAAAC-TGCAAAGACAGTTACAAAGATGAGGGTATAGATCAACTTC 1568928
Query 111589 AGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCAT 111648
|| | || ||||| ||| | || || |||| | ||| || ||||| ||| ||| |
Sbjct 1568929 AGCAAGTAATTGACACAATCAGAAATAATCCAAATGATCGACGTATTATAATGTCTGCTT 1568988
Query 111649 GGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTT 111707
|||| || | | ||||||| || ||||| |||||| | | ||| || |||
Sbjct 1568989 GGAATCCTGTCGATATCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTT 1569047
Query 111708 TATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTT 111767
| ||| | | || | | || || ||| | || || || ||| ||||| || |
Sbjct 1569048 TTTGTTGCCAATGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTG 1569107
Query 111768 GGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACA 111827
||||| || ||||||||||| ||||| | ||||| | | || |||||| ||||
Sbjct 1569108 GGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACT 1569167
Query 111828 AATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCAC 111887
||||| ||| || || ||| | ||| | | || ||||| ||||| || | || ||
Sbjct 1569168 GATCTCCGACCAGGGGATTTCGTCCACACTTTGGGCGATGCACATGTCTATAATAATCAT 1569227
Query 111888 ATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922
||||| ||| | ||| |||||| | ||| |||||
Sbjct 1569228 ATTGAAGCATTAAAAGAACAGTTAACGCGAAAACC 1569262
>seq7155
Length=3116674
Score = 96.9 bits (106), Expect = 9e-15
Identities = 120/161 (75%), Gaps = 4/161 (2%)
Strand=Plus/Minus
Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTG-TG 22546
|||||| | ||||||||||||| |||||||| || ||||| ||| || ||||| |
Sbjct 2758914 GAACGTGTAATTGCATTTGCTGCCGTTGAAGGTATCTTCTTCAGTGG--CAGTTTTGCTT 2758857
Query 22547 CAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAA 22606
| ||||| ||||| || ||||||| | ||||| || | || ||||| ||||| |||
Sbjct 2758856 CGATCTTCTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAA 2758797
Query 22607 TTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647
|| ||||||||||| |||||| || || || ||| ||
Sbjct 2758796 TTTCACGAGATGAGGGACTTCATTGTGACTTCGCATGTTTG 2758756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303233933403812
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |