Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7084 237 4e-57 seq7133 167 6e-36 seq7155 96.9 9e-15 >seq7084 Length=1258986 Score = 237 bits (262), Expect = 4e-57 Identities = 558/834 (67%), Gaps = 14/834 (2%) Strand=Plus/Minus Query 363433 AATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCAT 363492 ||||| | |||||||| || || ||||||||||||||||||||||| || ||||| ||| Sbjct 3091 AATGGCAAAATTGTTGAGCGACCACAGCATATGTTAATGCGTGTTGCCATCGGTATACAT 3032 Query 363493 TGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTCACG 363552 || || | ||||| || || ||||| || || | || | ||| || || Sbjct 3031 GGCGAAGACATCGATGCAGCAATCGAAACTTACAACTTGCTTTCCGAACGTTATTTTACA 2972 Query 363553 CACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTT 363612 || || | ||||| | | | ||||| ||| | || || |||| || |||||| Sbjct 2971 CATGCTTCTCCAACGCTTTTCGCTGCTGCCACTAAGCAGCCGCAATTGTCATCATGCTTT 2912 Query 363613 CTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGA--ATTGTG 363670 || || | ||| |||||||||||| || ||||| ||| ||| || | | | |||| Sbjct 2911 CTACTGACCATGGTGGACGATTCCATTGATGGTAT-TTTCACAT-CTGCACATCAATGTG 2854 Query 363671 CTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCC-ACAATG--TTCGTGCAC 363727 | | |||||||| ||| ||||| |||||| | || | ||| || | || ||| Sbjct 2853 CATTGATTTCCAAATCTGCTGGCGGTATTGGTCT---GAACGTACATTGCATACGCGCAA 2797 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 | || | ||| || ||| | | || ||||| |||| || ||| | || | Sbjct 2796 AAGGCACTGCAATTGCGGGTACAAATAGCAAATCAAATGGTTTGGTGCCTATGTTGCGAG 2737 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 |||| | |||| || | || || || || || | || || || || || |||| Sbjct 2736 TGTTCAATAATATAGCACGCTATGTGGATCAAGGGTGCGGTAAACGGCCCGGCGCCTTTG 2677 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || || ||||| || ||||| |||||||| || ||| | || | |||||||| Sbjct 2676 CCATCTACCTCGAACCATGGCATGCTGATATTTTCGAATTTTTGGATTTGAAGAAAAACA 2617 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 | || ||||| || ||||| | ||| |||||||||| | ||| | |||| | | Sbjct 2616 CTGGTAAAGAAGAGCATCGTGCCAGAGATTTGTTCTATGCCTTGTGGATACCTGATCTAT 2557 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAG 364027 ||||||| || || || || | | | | ||||| || | || |||||| | ||||| | Sbjct 2556 TTATGAAACGTGTAGAAGCCGATGAAGACTGGTCGCTAATGTGTCCACACAAGTGTCCCG 2497 Query 364028 GTCTTTCCGATGTATGGGGTGACGACTATG--TTGCTCTATACGAAAAGTATGAATCGGA 364085 || | || ||||||||||| || | | | | ||| |||| |||||| ||| Sbjct 2496 GTTTACATGAAGTATGGGGTGAAGAGTTCGAAAAGTTATATCTGAAA--TATGAACAGGA 2439 Query 364086 GGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCA 364145 ||| || ||||| ||| ||||| | || |||||| ||| || || ||||| Sbjct 2438 AGGACGTGCCAATAAGAAAATAAAAGCACAAAGTCTTTGGTTTAGCATTATTGAATCGCA 2379 Query 364146 GATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCA 364205 | ||||| || ||||| || |||||||| |||||| | || || || ||| || || Sbjct 2378 AGTGGAGACCGGCACACCATACATGTTGTATAAAGATGCTTGTAATCGAAAGAGTAATCA 2319 Query 364206 GCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATA 364259 ||| | |||| |||||| || || || |||||||||| ||| | ||||| Sbjct 2318 ACAGAATGTTGGCACAATTAAGTGTAGTAATTTATGTACCGAAATTGTGGAATA 2265 Score = 159 bits (176), Expect = 9e-34 Identities = 306/443 (69%), Gaps = 6/443 (1%) Strand=Plus/Minus Query 364717 AAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCA 364776 ||| | ||||||| |||||||| | | ||||||||||| || ||||| ||||| Sbjct 2037 AAGCAACATGGTATCCGCAACTCTTTGCTGCTTGCGCCCATGCCAACTGCTTCAACTGCT 1978 Query 364777 CAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGG 364836 || || | || ||||| |||| || ||||||| || ||| ||||| |||| || Sbjct 1977 CAAATTATGGGCAACAATGAGTCATTTGAACCGTACACTTCTAATATTTATACACGTCGT 1918 Query 364837 GTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAG-GATCTTTCCGACCG 364895 || ||||| || ||||||| || || ||| | || | || | | ||||| |||| Sbjct 1917 GTGCTTTCGGGTGAATTTCAAGTTGTAAATCATCACTT-GTTACGCGATCTAACCGAGTT 1859 Query 364896 CGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAA 364955 || |||||| ||| ||||| || |||| || || | || || | || | Sbjct 1858 GGGTTTGTGGGATGATGATATGAAAAATAATATTATAACCAGTCGCGGCTCCATACAACA 1799 Query 364956 CATTCCAGGATTTCCAGAAGATCTGAAGCC-TATTTACAAAACCGTATGGGAAATTTCCA 365014 ||| | | ||| | | | | || | | |||||||| || ||||| |||||| Sbjct 1798 TATTGAATCCATACCACAGCACAT-ACGCGATCTATACAAAACTGTTTGGGAGATTTCCG 1740 Query 365015 TGCGAACTCTC-ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCG 365073 || ||| ||| ||| | ||||| || ||||||||||| || ||| |||||| |||||| Sbjct 1739 TGAAAAC-CTCGATTAAAATGGCTGCAGATCGCGGTGCATTCATCGATCAGAGTCAGTCG 1681 Query 365074 TTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGG 365133 || ||| || | || || |||| | || | ||||||||| || || ||||||||||| Sbjct 1680 TTCAACATACACGTGGCTGAGCCCAACTATGGCAAGCTTACTTCTATACATTTCTACGGC 1621 Query 365134 TGGAAATCCGGTCTTAAGACAGG 365156 ||||| | ||||| ||||| || Sbjct 1620 TGGAAGGCAGGTCTCAAGACGGG 1598 >seq7133 Length=2056560 Score = 167 bits (184), Expect = 6e-36 Identities = 421/635 (66%), Gaps = 4/635 (1%) Strand=Plus/Plus Query 111290 AATGCGTTTTAATCTGTCAACTCATTTTCCACTTCTCACAACAAAGCGAACATATTGGAA 111349 |||||| || |||| || | ||||||| | || || ||||||||| || |||| Sbjct 1568630 AATGCGGTTCGATCTCCGAAATAGTTTTCCATTACTAACTACAAAGCGAGTATTTTGGCG 1568689 Query 111350 GGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGC 111409 | | | |||||| | ||||||||| ||| || | ||| | || || |||| Sbjct 1568690 TGCTGTCGCTGAAGAATTGCTGTGGTTTGTTCATGGTAAAACAGACGCTAAAATACTTCA 1568749 Query 111410 AGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGG 111469 || ||||||| | | || ||||||||||| | || || || |||| | || Sbjct 1568750 AGAAAAAAATATTCACATATGGGATGGAAACAGTAATCGGGAGTTCTTAGACAAATGCGG 1568809 Query 111470 TCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTT 111529 || ||| | || ||||||||||| || |||||||| || ||||| ||||| || || Sbjct 1568810 ATTTTCCGATAGGGAGGAAGGTGATCTAGGCCCAGTTTATGGTTTTCAGTGGCGTCATTT 1568869 Query 111530 TGGTGCAGACTACAAAACCATGCAC-GACTCATATGATTCACAGGGAACTGATCAATTAC 111588 ||| || | |||| || | |||| ||| || | |||| | |||||| | | Sbjct 1568870 TGGGGCCAAGTACAGAAAC-TGCAAAGACAGTTACAAAGATGAGGGTATAGATCAACTTC 1568928 Query 111589 AGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCAT 111648 || | || ||||| ||| | || || |||| | ||| || ||||| ||| ||| | Sbjct 1568929 AGCAAGTAATTGACACAATCAGAAATAATCCAAATGATCGACGTATTATAATGTCTGCTT 1568988 Query 111649 GGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTT 111707 |||| || | | ||||||| || ||||| |||||| | | ||| || ||| Sbjct 1568989 GGAATCCTGTCGATATCCCTCAAATGGCTCTACCACCTTGTCATTGTCT-TGCACAATTT 1569047 Query 111708 TATGTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTT 111767 | ||| | | || | | || || ||| | || || || ||| ||||| || | Sbjct 1569048 TTTGTTGCCAATGGAGAGTTATCTTGTCAATTATACCAACGCAGTGCCGATATGGGATTG 1569107 Query 111768 GGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACA 111827 ||||| || ||||||||||| ||||| | ||||| | | || |||||| |||| Sbjct 1569108 GGTGTACCATTTAATATTGCCTCGTACGCTTTGCTTACCTATATGATTGCTCATATTACT 1569167 Query 111828 AATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCAC 111887 ||||| ||| || || ||| | ||| | | || ||||| ||||| || | || || Sbjct 1569168 GATCTCCGACCAGGGGATTTCGTCCACACTTTGGGCGATGCACATGTCTATAATAATCAT 1569227 Query 111888 ATTGATGCACTTAAAACACAGTTGAAGCGCAAACC 111922 ||||| ||| | ||| |||||| | ||| ||||| Sbjct 1569228 ATTGAAGCATTAAAAGAACAGTTAACGCGAAAACC 1569262 >seq7155 Length=3116674 Score = 96.9 bits (106), Expect = 9e-15 Identities = 120/161 (75%), Gaps = 4/161 (2%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCA-TTTTG-TG 22546 |||||| | ||||||||||||| |||||||| || ||||| ||| || ||||| | Sbjct 2758914 GAACGTGTAATTGCATTTGCTGCCGTTGAAGGTATCTTCTTCAGTGG--CAGTTTTGCTT 2758857 Query 22547 CAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAA 22606 | ||||| ||||| || ||||||| | ||||| || | || ||||| ||||| ||| Sbjct 2758856 CGATCTTCTGGCTTAAGAAACGTGGTTTAATGCCAGGCTTGACATTTTCCAATGAACTAA 2758797 Query 22607 TTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATG 22647 || ||||||||||| |||||| || || || ||| || Sbjct 2758796 TTTCACGAGATGAGGGACTTCATTGTGACTTCGCATGTTTG 2758756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303233933403812