Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq3141 87.8 2e-12 seq7104 84.2 2e-11 >seq3141 Length=2848 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||||||||| || ||||| || ||||| || ||||| || | || ||| | Sbjct 1343 AATGCAAATTTTCGTAAAAACCCTTACGGGTAAGACCATCACTCTTGAGGTTGAGCCTTC 1402 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| ||| || || |||||| ||||| ||||| | || |||||| Sbjct 1403 GGATACTATTGAACATGTTAAGTCCAAAATTCAAGATAAGGAAGGAATTCCGCCTGATCA 1462 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 || | || |||| || || || ||||| ||||||| || |||| || ||||| Sbjct 1463 ACAGCGTCTAATTTTCGCCGGAAAGCAATTGGAAGATGGTCGCACATTGGCTGACTATAA 1522 Query 115465 CATTCAAAAAGAGTCTAC 115482 ||||| ||||||||||| Sbjct 1523 TATTCAGAAAGAGTCTAC 1540 >seq7104 Length=1453772 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| | |||||||||||||| || | || ||| | | Sbjct 422165 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 422224 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 || || ||| | || ||| |||||| ||||| ||||| ||||| ||||| Sbjct 422225 GATACAATTGAGAATGTCAAAGCTAAAATTCAAGATAAGGAAGGAATCCCCCCAGATCAA 422284 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | | |||| || |||||||| || || |||| || || |||| ||||| Sbjct 422285 CAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTATAAT 422344 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 ||||| || || || ||| ||||| Sbjct 422345 ATTCAGAAGGAATCCACTCTACAT 422368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425306852315920