Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq7156 131 2e-25
seq7104 122 8e-23
seq7084 105 6e-18
seq3141 96.9 3e-15
>seq7156
Length=3407544
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | |||||| || ||||| | ||| ||||||||||| |||||||| ||| |
Sbjct 1526508 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 1526567
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| || || | || || || ||| |||| |||||||| || || || |||
Sbjct 1526568 AAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 1526627
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| |||||| |||| | || | || || | | |||||
Sbjct 1526628 ATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACC 1526687
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| ||||| |||| ||||| ||||||||||||||
Sbjct 1526688 TCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734
>seq7104
Length=1453772
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || || || || |||||||||| || || ||||| ||||| || || ||| |
Sbjct 422391 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGAC 422332
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||||| | ||| ||||| ||| | || ||||| || || || || |||
Sbjct 422331 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 422272
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
|||||||| || || ||| ||| |||| || | ||| | ||||||| | ||| |
Sbjct 422271 ATTCCTTCCTTATCT-TGAATTTTAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAAC 422213
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | |||||| || || | |||||| |||||||||||||||
Sbjct 422212 CTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 422164
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || ||||| | || |||||||| || ||||||||||||
Sbjct 422164 GCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGA 422105
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||||| ||| || || || || || || |||||||||| || || || || ||
Sbjct 422104 CAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGG 422045
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185
||||||||||||||| ||| | | |||| | | | || | |||||||| | || |
Sbjct 422044 GATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAA 421986
Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || | || || ||||| || |||||
Sbjct 421985 CCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937
>seq7084
Length=1258986
Score = 105 bits (116), Expect = 6e-18
Identities = 225/336 (67%), Gaps = 0/336 (0%)
Strand=Plus/Plus
Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108
|||| ||||| || || ||||| || || | | ||||||||| ||| | |||||
Sbjct 1880 AAGTGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAA 1939
Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168
||| | |||||||| ||||| || ||||||| |||||||| || | || || ||||||
Sbjct 1940 GTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATG 1999
Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228
||| | || || || ||||| | || || | ||| || | ||||| | |
Sbjct 2000 GGCGCAAGCAGCAAAGAGTTGCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTC 2059
Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288
|||| ||| || ||| || | ||||||||||| ||||| ||||| |||| ||
Sbjct 2060 CAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTA 2119
Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCC 145348
|||| |||| | | | || |||| | ||| || | |||||||| ||
Sbjct 2120 ACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCT 2179
Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGC 145384
|||| ||||| | ||||| || ||| ||||||
Sbjct 2180 TCCAATGCGCCATAGTAAATAGTTTCGAATATTTGC 2215
>seq3141
Length=2848
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063
|| |||||| | | ||| || |||||||| | || ||||| || ||||| || || ||
Sbjct 1574 TGCGCCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTC 1515
Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123
|| ||||| || || | ||||| || ||| | |||| |||||| || || ||
Sbjct 1514 AGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGG 1455
Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183
|| |||||||| || || ||||| ||| | || || | |||||| | | |||
Sbjct 1454 CGGAATTCCTTCCTTATCTTGAATTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTC 1395
Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
| || | || | ||| ||||| || || |||||||||||||| |||||
Sbjct 1394 AACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCAT 1344
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471970519453440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |