Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7156 131 2e-25 seq7104 122 8e-23 seq7084 105 6e-18 seq3141 96.9 3e-15 >seq7156 Length=3407544 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | |||||| || ||||| | ||| ||||||||||| |||||||| ||| | Sbjct 1526508 CCACCACGAAGACGCAGAACCAAATGGAGGGTTGACTCCTTTTGGATGTTGTAGTCGGAC 1526567 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | || || || ||| |||| |||||||| || || || ||| Sbjct 1526568 AAGGTGCGACCATCTTCCAATTGTTTTCCGGCGAAGATCAAACGCTGTTGATCTGGGGGG 1526627 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| |||| | || | || || | | ||||| Sbjct 1526628 ATACCCTCTTTGTCTTGGATTTTAGCTTTGACATTTTCGATGGTGTCAGAAGGCTCGACC 1526687 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| |||| ||||| |||||||||||||| Sbjct 1526688 TCTAAGGTGATGGTCTTACCAGTTAAGGTTTTGACGAAAATCTGCAT 1526734 >seq7104 Length=1453772 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || || || || |||||||||| || || ||||| ||||| || || ||| | Sbjct 422391 CCACCACGTAAGCGTAGAACTAAATGTAGAGTGGATTCCTTCTGAATATTATAGTCGGAC 422332 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| | ||| ||||| ||| | || ||||| || || || || ||| Sbjct 422331 AGTGTGCGTCCATCCTCCAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGGGGG 422272 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||| || || ||| ||| |||| || | ||| | ||||||| | ||| | Sbjct 422271 ATTCCTTCCTTATCT-TGAATTTTAGCTTTGACATTCTCAATTGTATCGGAAGGCTCAAC 422213 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || | |||||| ||||||||||||||| Sbjct 422212 CTCCAAAGTGATGGTTTTTCCCGTCAAAGTTTTGACGAAAATCTGCATG 422164 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || ||||| | || |||||||| || |||||||||||| Sbjct 422164 GCCACCACGTAGACGAAGAACCAAATGAAGTGTAGACTCCTTCTGGATGTTGTAATCGGA 422105 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||| || || || || || || |||||||||| || || || || || Sbjct 422104 CAGAGTGCGTCCGTCTTCCAGTTGTTTACCGGCAAAGATTAAACGTTGTTGATCTGGGGG 422045 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGA 131185 ||||||||||||||| ||| | | |||| | | | || | |||||||| | || | Sbjct 422044 GATTCCTTCTTTGTC-TTGAATCTTAGCTTTAACATTTTCAATAGTATCGGATGGTTCAA 421986 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || || || | || || ||||| || ||||| Sbjct 421985 CCTCCAGAGTGATGGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 421937 >seq7084 Length=1258986 Score = 105 bits (116), Expect = 6e-18 Identities = 225/336 (67%), Gaps = 0/336 (0%) Strand=Plus/Plus Query 145049 AAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGAC 145108 |||| ||||| || || ||||| || || | | ||||||||| ||| | ||||| Sbjct 1880 AAGTGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAA 1939 Query 145109 GTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATG 145168 ||| | |||||||| ||||| || ||||||| |||||||| || | || || |||||| Sbjct 1940 GTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATG 1999 Query 145169 TACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCC 145228 ||| | || || || ||||| | || || | ||| || | ||||| | | Sbjct 2000 GGCGCAAGCAGCAAAGAGTTGCGGATACCATGTTGCTTTATTTTCTCCTTCAATTCGGTC 2059 Query 145229 CAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTG 145288 |||| ||| || ||| || | ||||||||||| ||||| ||||| |||| || Sbjct 2060 CAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGTAAAATACCCTTACTA 2119 Query 145289 GCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCC 145348 |||| |||| | | | || |||| | ||| || | |||||||| || Sbjct 2120 ACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCTAATTCGCAACTGGCT 2179 Query 145349 TCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGC 145384 |||| ||||| | ||||| || ||| |||||| Sbjct 2180 TCCAATGCGCCATAGTAAATAGTTTCGAATATTTGC 2215 >seq3141 Length=2848 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131004 TGAGCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC 131063 || |||||| | | ||| || |||||||| | || ||||| || ||||| || || || Sbjct 1574 TGCGCCACCTCTAAGACGAAGTACTAAATGCAATGTAGACTCTTTCTGAATATTATAGTC 1515 Query 131064 GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGG 131123 || ||||| || || | ||||| || ||| | |||| |||||| || || || Sbjct 1514 AGCCAATGTGCGACCATCTTCCAATTGCTTTCCGGCGAAAATTAGACGCTGTTGATCAGG 1455 Query 131124 AGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTC 131183 || |||||||| || || ||||| ||| | || || | |||||| | | ||| Sbjct 1454 CGGAATTCCTTCCTTATCTTGAATTTTGGACTTAACATGTTCAATAGTATCCGAAGGCTC 1395 Query 131184 GATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | || | || | ||| ||||| || || |||||||||||||| ||||| Sbjct 1394 AACCTCAAGAGTGATGGTCTTACCCGTAAGGGTTTTTACGAAAATTTGCAT 1344 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471970519453440