Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq7155 277 2e-69 seq7084 230 3e-55 >seq7155 Length=3116674 Score = 277 bits (306), Expect = 2e-69 Identities = 395/554 (71%), Gaps = 3/554 (1%) Strand=Plus/Plus Query 32642 TAAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAA 32701 |||||||| ||||||||||||||||| || || || || ||||| |||| ||||| Sbjct 2758741 TAAATGTTGGAACATCAAACATGCGAAGTCACAATGAAGTCCCTCATCTCGTGAAATTAG 2758800 Query 32702 TTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGC 32761 ||| |||||||| || | || ||||||| ||||| || |||||||| || || || || Sbjct 2758801 TTCATTGGAAAATGTCAAGCCTGGCATTAAACCACGTTTCTTAAGCCAGAAGATCGAAGC 2758860 Query 32762 AAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA 32821 ||| ||| ||||| || ||||| || || ||||| ||||| | | || ||| | Sbjct 2758861 AAAACTGCCACTGAAGAAGATACCTTCAACGGCAGCAAATGCAATTACACGTTCACCAAA 2758920 Query 32822 ACCGGCG--CTGTCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 32878 ||| || | | | |||| | |||||||| ||||| ||||| ||| Sbjct 2758921 GTTGGCTGACTTCGAGGAAATCCAAGCAAGCGCCCAATCTGCCTTGCGCTTTACGGCAGG 2758980 Query 32879 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 32938 |||||||||||||||||| || | || || ||| || || |||| ||||||||| Sbjct 2758981 CATTGTCTCTATAGCATTGAATAAGTAATTCCTTTGTTTCGAGTCCTTAATATATGTATC 2759040 Query 32939 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 32998 ||| || | ||||||||||| ||||| | || || || || ||||||||||| ||||| Sbjct 2759041 AATTAATATGCTATACATTTCAGAATGCACATTCTCCATCGCAATTTGAAATCCATAGAA 2759100 Query 32999 GCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 33058 ||| | ||||| || | || ||||| || || ||||| ||| |||||||||||| Sbjct 2759101 GCAACGTGCCTCTGTCACTTGGACTTCCTGGCAGAAACGTTCAACTACATTTTCATTCAC 2759160 Query 33059 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGG 33118 || || ||| || || ||||| || || || ||| ||||||| | ||| | Sbjct 2759161 AATACCATCAGATGCGGCGAAAAAGGCTAACACGTGTGAAATAAAATGTCGTTCATTATC 2759220 Query 33119 TGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAA 33178 || || |||||||| ||||||||||| | ||| ||||| || |||||||| || Sbjct 2759221 AGTGAGACGTGCCCAATCATCCATATCTTTAGAAAGATCTACTTCCTCTACTGTCCAGAA 2759280 Query 33179 TGATGCCTCTGCCT 33192 ||||| ||||||| Sbjct 2759281 CGATGCTTCTGCCT 2759294 >seq7084 Length=1258986 Score = 230 bits (254), Expect = 3e-55 Identities = 598/894 (67%), Gaps = 22/894 (2%) Strand=Plus/Plus Query 62787 CCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTT 62846 ||| ||||| | || || || || | |||||||||||| || || || | ||| |||| Sbjct 2260 CCGAATATTCCACAATTTCGGTACATAAATTACTACACTTAATTGTGCCAACATTCTGTT 2319 Query 62847 GATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCT 62906 ||||||||||| ||||| ||||| ||||| | ||| |||| || || || || | | Sbjct 2320 GATTACTCTTTCGATTACAAGCATCTTTATACAACATGTATGGTGTGCCGGTCTCCACTT 2379 Query 62907 GAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAG-ATTTGTATCTCTT 62964 | ||||| ||||| ||| | | |||| | || |||||| | ||| | | || | Sbjct 2380 GCGATTCAATAAT-GCTAAACCAAAGACTTTGTGCTTTTATTTTCTTATTGGCACGTCCT 2438 Query 62965 TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCC 63024 | || || | ||| ||| || ||||||||| || ||||| || | | | || Sbjct 2439 TCCTGTT-CATATTTCAGATATAACTTTTCGAACTCTTCACCCCATACTTCATGTAAACC 2497 Query 63025 AGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATC--CTTC-ACTCGTTTCAT 63081 ||||| | | |||||||| | |||||| ||| ||||| |||| || |||||||| Sbjct 2498 GGGACACTTGTGTGGACACATTAGCGACCAGTCT---TCATCGGCTTCTACACGTTTCAT 2554 Query 63082 AAAGAGATCAGGAATCCAAAGAGCTATA-AATAGATCTCTGGTTCTATGTTCCTCGTTTC 63140 ||| |||||||| ||||| | || ||| || | |||||||| | ||| || || || | Sbjct 2555 AAATAGATCAGGTATCCACA-AGGCATAGAACAAATCTCTGGCACGATGCTCTTCTTTAC 2613 Query 63141 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 63200 | || || || || | ||| | || | | |||||||| |||||| ||||| | ||| | Sbjct 2614 CAGTGTTTTTCTTCAAATCCAAAAATTCGAAAATATCAGCATGCCATGGTTCGAGGTAGA 2673 Query 63201 TGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 63260 |||| | | || |||||||| | || ||||| | || | || | ||||| Sbjct 2674 TGGCAAAGGCGCCGGGCCGTTTACCGCACCCTTGATCCACATAGCGTGCTATATTATTGA 2733 Query 63261 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTC 63320 | |||| |||||| || | | |||||| ||| | | ||| || || | || | | Sbjct 2734 ACACTCGCAACATAGGCACCAAACCATTTGATTTGCTATTTGTACCCGCAATTGCAGTGC 2793 Query 63321 CACTGGCACGAAT---AT-TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATT 63376 | | || || || || ||| || ||||| || || || || ||| || || Sbjct 2794 CTTTTGCGCGTATGCAATGTAC--GTT--CAGACCAATACCGCCAGCAGATTTGGAAATC 2849 Query 63377 AATGCGCATCG-TTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 63435 ||||| ||| | | | | | | | | || || || || ||| |||| |||| | || Sbjct 2850 AATGCACATTGATGTGCAGATGTGA-AAATACCATCAATGGAATCGTCCACCATGGTCAG 2908 Query 63436 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 63495 |||||| || |||| ||| | | |||| | ||| || | || |||||||| Sbjct 2909 TAGAAAGCATGATGACAATTGCGGCTGCTTAGTGGCAGCAGCGAAAAGCGTTGGAGAAGC 2968 Query 63496 GTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCA 63555 || ||||| | ||| ||||| | ||||| || || || |||| || || || Sbjct 2969 ATGTGTAAAATAACGTTCGGAAAGCAAGTTGTAAGTTTCGATTGCTGCATCGATGTCTTC 3028 Query 63556 TTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 63615 ||| || || | || |||||||||||||| ||||| |||| ||||| || ||| Sbjct 3029 GCCATGTATACCGATGGCAACACGCATTAACATATGCTGTGGTCGCTCAACAATTTTGCC 3088 Query 63616 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 63669 || | || | ||| ||||| ||| | ||||||||||||||||| || || Sbjct 3089 ATTCAACTTTAGCAAATAGGAACGTTCAAGTGTTTTAAAACCAAAATAATTATA 3142 Score = 205 bits (226), Expect = 1e-47 Identities = 443/656 (68%), Gaps = 15/656 (2%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||||||||| | ||| ||||| ||||| || ||||| |||| ||||| ||| Sbjct 1571 GCTGGTTTCGTACGCAAATAATACATGCCCGTCTTGAGACCTGCCTTCCAGCCGTAGAAA 1630 Query 61931 TGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGACTT 61990 || ||| || || ||| ||| | || || || | || || || | || ||||| Sbjct 1631 TGTATAGAAGTAAGCTTGCCATAGTTGGGCTCAGCCACGTGTATGTTGAACGACTGACTC 1690 Query 61991 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTTCC 62050 ||||||||||| || || | |||||||||||||| || || || | ||| ||| Sbjct 1691 TGATCGATGAATGCACCGCGATCTGCAGCCATTTTAATCGAGGTTTTCACGGAAATCTCC 1750 Query 62051 CAAATAGTTTTATAAAC-TCGCTTAATATCTTCTGGAA-GGTTTG--TATTCTGAATGGA 62106 |||| |||||| || | |||| || | | | ||| | || || ||| || ||||| Sbjct 1751 CAAACAGTTTTGTATAGATCGCGTA-TGTGCTGTGGTATGGATTCAATATGTTGTATGGA 1809 Query 62107 TCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAA 62166 || | | | ||||| |||| || || ||||||| ||| || |||||||| Sbjct 1810 GCCGCGACTGGTTATAATATTATTTTTCATATCATCATCCCACAAACCCAACTCGGTTAG 1869 Query 62167 AACTC-TAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 62225 | | | ||| || || |||| || ||||||||||| || || | || | || || | Sbjct 1870 ATCGCGTAACAAG-TGATGATTTACAACTTGAAATTCACCCGAAAGCACACGACGTGTAT 1928 Query 62226 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62285 |||||||| || |||||||| | |||||||| || |||| ||||||||||||||| | Sbjct 1929 AAATATTAGAAGTGTACGGTTCAAATGACTCATTGTTGCCCATAATTTGAGCAGTTGAAG 1988 Query 62286 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTT--CTGATTTTATC 62343 |||| ||||| || || | || ||| || | | ||| ||||| | ||||| || Sbjct 1989 CAGTTGGCATGGGCGCAAGCAGCAAAGAGTTGCGGATACC--ATGTTGCTTTATTTTCTC 2046 Query 62344 TTTTA--GAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGT 62401 || | ||| ||||||||||||||| | ||| ||| Sbjct 2047 CTTCAATTCGGT--CCAATTCCAAAGATCAGTTGGTGTTTTATCCCACATGTCATACTGT 2104 Query 62402 AGAATACCGTTACTGGCGTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCT 62461 | |||||| ||||| || || ||| ||| || || || | || | || |||||| Sbjct 2105 AAAATACCCTTACTAACGGGTGAACCTTTATACGTTTCATAGGTGCCATATTTTTCAGCT 2164 Query 62462 AGTTCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATT 62517 | ||| ||||| || || ||||| || || ||||| |||||||| || | || ||| Sbjct 2165 AATTCGCAACTGGCTTCCAATGCGCCATAGTAAATAGTTTCGAATATTTGCTGATT 2220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633575242413600