Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq7104 125 6e-24 >seq7104 Length=1453772 Score = 125 bits (138), Expect = 6e-24 Identities = 159/216 (74%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || |||||||| || ||| ||||||| | || || ||| | || Sbjct 422165 ATGCAGATTTTCGTCAAAACTTTGACGGGAAAAACCATCACTTTGGAGGTTGAGCCTTCC 422224 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || || ||| | || |||| |||| ||| || || ||||| || || || || Sbjct 422225 GATACAATTGAG--AATGTCAAAGCTAAAATTCAA-GATAAGGAAGGAATCCCCCCAGAT 422281 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| || | ||||| || |||||||| || || |||| ||||| || ||| || Sbjct 422282 CAACAACGTTTGATTTTCGCTGGCAAACAGTTGGAGGATGGACGCACACTGTCCGACTAT 422341 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTA 25211 |||||||| || |||||||| ||||||||||| ||| Sbjct 422342 AATATTCAGAAGGAATCCACTCTACATTTAGTTCTA 422377 Score = 111 bits (122), Expect = 1e-19 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || ||||| ||||| || || ||||||| | || || || | || Sbjct 421936 AATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTCTGGAGGTTGAACCATC 421995 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || ||||| || | || |||| || | ||| ||||||||||| || || || || Sbjct 421996 CGATACTATTGAA--AATGTTAAAGCTAAGATTCAA-GACAAAGAAGGAATCCCCCCAGA 422052 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | || |||||||| |||||| | ||||| | |||||| || |||||| Sbjct 422053 TCAACAACGTTTAATCTTTGCCGGTAAACAACTGGAAGACGGACGCACTCTGTCCGATTA 422112 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| || || || || || || || ||||| || || Sbjct 422113 CAACATCCAGAAGGAGTCTACACTTCATTTGGTTCT 422148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433290155028290