Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq6970 95.1 3e-16 >seq6970 Length=570679 Score = 95.1 bits (104), Expect = 3e-16 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 3334 CCCATGAAGCGAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCG 3393 || ||| ||| |||||||| | | |||| |||||| || |||||||| ||||| || Sbjct 182612 CCGATGGCGCGTGTCTTTCCGAAAGTCACCAAATGTACATTCCACAAATATGGTCCATCT 182553 Query 3394 GGCTCCCTGGAAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAG 3453 || || || |||| | ||| || ||||| | | ||| ||| | ||||| ||||| Sbjct 182552 GGTTCGGTGCAAAAGTTCGACGGTCTCTGTGTGTTGCCGCTGAATATTGTCAATGAGAAA 182493 Query 3454 ATCTACATTTTCCTCTGGTTCTGGTTC 3480 |||||| | ||||| |||||||||||| Sbjct 182492 ATCTACGTATTCCTGTGGTTCTGGTTC 182466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12479021841000