Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq7159 95.1 3e-14 >seq7159 Length=3702663 Score = 95.1 bits (104), Expect = 3e-14 Identities = 215/319 (67%), Gaps = 16/319 (5%) Strand=Plus/Plus Query 68496 GCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCGTATAACATGTATGTA 68555 || ||| |||||| | |||||| || || || ||||| | ||||| ||||||| | Sbjct 2262822 GCCAAGATGTACGGCTTTTGGATAGTTATTAACTATCGTGAAGCATATAATATGTATGCA 2262881 Query 68556 TGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACA--GAGGCCATCAGTTCGTGACTC 68613 || || || | ||||||||||| |||| || | || | | |||||||| | Sbjct 2262882 TGTAATGGCATATTGTTCAATCACGAA--TCCCCACGTCGTGGTGAAAATTTCGTGACAC 2262939 Query 68614 GTAAAATCACGAAGGTGGTCGCGAATAT-TTTCAATGGTGTCGAAAAATGCA-TGTATC- 68670 | ||||| ||| ||| ||||| || ||||| || | || || | | | || Sbjct 2262940 GCAAAATAACGCGTTCGGTAGCGAAAATATTTCA------TCAACAATTGGAATCTTTCG 2262993 Query 68671 ---TCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAA 68727 | |||||| | || | ||| | |||||||| | || | ||||||||| || || | Sbjct 2262994 AATTGGGTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCCA 2263053 Query 68728 TGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGGAAAACAA 68787 ||||| ||||| ||||| || | || | ||| | ||||||||| || || |||| Sbjct 2263054 TGTGGATGATGTTGCAATTGGAAAAACCTGCTGATTTTGTGATTGCCACCGGTGAAACGC 2263113 Query 68788 CGAGCGTTCGTGAGTTCGT 68806 ||||||||||| || || Sbjct 2263114 ACAGCGTTCGTGAATTTGT 2263132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102778739762100