Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq7159 95.1 3e-14
>seq7159
Length=3702663
Score = 95.1 bits (104), Expect = 3e-14
Identities = 215/319 (67%), Gaps = 16/319 (5%)
Strand=Plus/Plus
Query 68496 GCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAGTCGTATAACATGTATGTA 68555
|| ||| |||||| | |||||| || || || ||||| | ||||| ||||||| |
Sbjct 2262822 GCCAAGATGTACGGCTTTTGGATAGTTATTAACTATCGTGAAGCATATAATATGTATGCA 2262881
Query 68556 TGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACA--GAGGCCATCAGTTCGTGACTC 68613
|| || || | ||||||||||| |||| || | || | | |||||||| |
Sbjct 2262882 TGTAATGGCATATTGTTCAATCACGAA--TCCCCACGTCGTGGTGAAAATTTCGTGACAC 2262939
Query 68614 GTAAAATCACGAAGGTGGTCGCGAATAT-TTTCAATGGTGTCGAAAAATGCA-TGTATC- 68670
| ||||| ||| ||| ||||| || ||||| || | || || | | | ||
Sbjct 2262940 GCAAAATAACGCGTTCGGTAGCGAAAATATTTCA------TCAACAATTGGAATCTTTCG 2262993
Query 68671 ---TCGGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGATTACGTAGAAGCAA 68727
| |||||| | || | ||| | |||||||| | || | ||||||||| || || |
Sbjct 2262994 AATTGGGTAATCTCGACTCGAAACGTGATTGGGGTCACGCAATGGATTACGTGGAGGCCA 2263053
Query 68728 TGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATTGCAACAGGGAAAACAA 68787
||||| ||||| ||||| || | || | ||| | ||||||||| || || ||||
Sbjct 2263054 TGTGGATGATGTTGCAATTGGAAAAACCTGCTGATTTTGTGATTGCCACCGGTGAAACGC 2263113
Query 68788 CGAGCGTTCGTGAGTTCGT 68806
||||||||||| || ||
Sbjct 2263114 ACAGCGTTCGTGAATTTGT 2263132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102778739762100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |