Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7164 107 2e-18 >seq7164 Length=6205789 Score = 107 bits (118), Expect = 2e-18 Identities = 245/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Plus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||||||||||||||| || | || ||||| | ||||||||| | |||| ||||| Sbjct 6011364 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 6011423 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 | | |||||||||| | ||||||||| | || | | || || ||||| | Sbjct 6011424 ATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAATGGATCGTCGGCTG 6011483 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 171901 | | || || || | || ||||| || ||||| || || | || | | Sbjct 6011484 GGTGGAATATGAGTCGCG--TCAACGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 6011541 Query 171902 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTG 171961 || |||||| |||||| ||||| || || |||||||||| || || | | ||| Sbjct 6011542 -ACA-ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTCCAATAAATTA 6011599 Query 171962 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT 172021 ||||| ||||| |||| ||| | | ||||| ||||| || ||| || || || | Sbjct 6011600 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 6011659 Query 172022 TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATC 172081 ||||||||||||||||| ||| | || || || | | | ||| || || || |||| | Sbjct 6011660 TCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCGCAACTTTCACC 6011719 Query 172082 TCA 172084 ||| Sbjct 6011720 TCA 6011722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597300092051280