Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq7164 107 2e-18
>seq7164
Length=6205789
Score = 107 bits (118), Expect = 2e-18
Identities = 245/363 (67%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785
|||||||||||||||| || | || ||||| | ||||||||| | |||| |||||
Sbjct 6011364 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 6011423
Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845
| | |||||||||| | ||||||||| | || | | || || ||||| |
Sbjct 6011424 ATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAATGGATCGTCGGCTG 6011483
Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 171901
| | || || || | || ||||| || ||||| || || | || | |
Sbjct 6011484 GGTGGAATATGAGTCGCG--TCAACGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 6011541
Query 171902 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTG 171961
|| |||||| |||||| ||||| || || |||||||||| || || | | |||
Sbjct 6011542 -ACA-ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTCCAATAAATTA 6011599
Query 171962 ATATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACT 172021
||||| ||||| |||| ||| | | ||||| ||||| || ||| || || || |
Sbjct 6011600 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 6011659
Query 172022 TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATC 172081
||||||||||||||||| ||| | || || || | | | ||| || || || |||| |
Sbjct 6011660 TCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCGCAACTTTCACC 6011719
Query 172082 TCA 172084
|||
Sbjct 6011720 TCA 6011722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597300092051280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |