Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq6874 102 9e-17 seq7134 95.1 1e-14 seq7141 87.8 2e-12 seq7106 84.2 2e-11 seq6975 82.4 8e-11 >seq6874 Length=275246 Score = 102 bits (112), Expect = 9e-17 Identities = 72/81 (89%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 56999 AAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||||| ||||||| |||| | |||||||||| ||||||||||||||||||||| |||| Sbjct 256444 AAAATATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 256503 Query 57058 TCACCACTATACTACCGAGGA 57078 | ||||||||||||||||||| Sbjct 256504 TGACCACTATACTACCGAGGA 256524 >seq7134 Length=2137532 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 104813 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 104754 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 104753 TACTACCGAGGA 104742 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 || |||| |||| || | | ||| |||||| ||||||||||||||||||||| ||||| Sbjct 1169574 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1169633 Query 57059 CACCACTATACTACCGAGGATTG 57081 |||||||||||| |||||| || Sbjct 1169634 GACCACTATACTATCGAGGACTG 1169656 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 57091 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 57150 Query 57067 TACTACCGAGGATT 57080 ||||| |||||||| Sbjct 57151 TACTATCGAGGATT 57164 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 1799550 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1799609 Query 57067 TACTACCGAGGAT-TGAA 57083 ||||| ||||||| |||| Sbjct 1799610 TACTATCGAGGATGTGAA 1799627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 108636 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 108695 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 108696 ATACTATCGAGGA 108708 >seq7141 Length=2858276 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 |||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||| Sbjct 1723039 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 1723098 Query 57065 TATACTACCGAGGA--TTGAATATA 57087 ||||||| |||||| ||||| ||| Sbjct 1723099 TATACTATCGAGGATGTTGAAAATA 1723123 >seq7106 Length=1862430 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1615362 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1615303 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1615302 ATACTATCGAGGAT 1615289 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1617423 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1617364 Query 57066 ATACTACCGAGGAT 57079 |||||| ||||||| Sbjct 1617363 ATACTATCGAGGAT 1617350 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||| Sbjct 1726474 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1726533 Query 57066 ATACTACCGAGGATTG 57081 |||||| |||||| || Sbjct 1726534 ATACTATCGAGGACTG 1726549 >seq6975 Length=485666 Score = 82.4 bits (90), Expect = 8e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 350228 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 350169 Query 57067 TACTACCGAGGAT 57079 ||||| ||||||| Sbjct 350168 TACTATCGAGGAT 350156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543164141713440