Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq6874 102 9e-17
seq7134 95.1 1e-14
seq7141 87.8 2e-12
seq7106 84.2 2e-11
seq6975 82.4 8e-11
>seq6874
Length=275246
Score = 102 bits (112), Expect = 9e-17
Identities = 72/81 (89%), Gaps = 1/81 (1%)
Strand=Plus/Plus
Query 56999 AAAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057
||||| ||||||| |||| | |||||||||| ||||||||||||||||||||| ||||
Sbjct 256444 AAAATATTTCTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 256503
Query 57058 TCACCACTATACTACCGAGGA 57078
| |||||||||||||||||||
Sbjct 256504 TGACCACTATACTACCGAGGA 256524
>seq7134
Length=2137532
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 104813 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 104754
Query 57067 TACTACCGAGGA 57078
||||||||||||
Sbjct 104753 TACTACCGAGGA 104742
Score = 87.8 bits (96), Expect = 2e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 56999 AAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058
|| |||| |||| || | | ||| |||||| ||||||||||||||||||||| |||||
Sbjct 1169574 AATATTTACTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACT 1169633
Query 57059 CACCACTATACTACCGAGGATTG 57081
|||||||||||| |||||| ||
Sbjct 1169634 GACCACTATACTATCGAGGACTG 1169656
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 57091 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 57150
Query 57067 TACTACCGAGGATT 57080
||||| ||||||||
Sbjct 57151 TACTATCGAGGATT 57164
Score = 84.2 bits (92), Expect = 2e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 1799550 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 1799609
Query 57067 TACTACCGAGGAT-TGAA 57083
||||| ||||||| ||||
Sbjct 1799610 TACTATCGAGGATGTGAA 1799627
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 108636 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 108695
Query 57066 ATACTACCGAGGA 57078
|||||| ||||||
Sbjct 108696 ATACTATCGAGGA 108708
>seq7141
Length=2858276
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/85 (84%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064
|||||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||
Sbjct 1723039 TTCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 1723098
Query 57065 TATACTACCGAGGA--TTGAATATA 57087
||||||| |||||| ||||| |||
Sbjct 1723099 TATACTATCGAGGATGTTGAAAATA 1723123
>seq7106
Length=1862430
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1615362 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1615303
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 1615302 ATACTATCGAGGAT 1615289
Score = 84.2 bits (92), Expect = 2e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1617423 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1617364
Query 57066 ATACTACCGAGGAT 57079
|||||| |||||||
Sbjct 1617363 ATACTATCGAGGAT 1617350
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065
||||| || | | ||| |||||| ||||||||||||||||||||| ||||| ||||||
Sbjct 1726474 TCTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACT 1726533
Query 57066 ATACTACCGAGGATTG 57081
|||||| |||||| ||
Sbjct 1726534 ATACTATCGAGGACTG 1726549
>seq6975
Length=485666
Score = 82.4 bits (90), Expect = 8e-11
Identities = 62/73 (85%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066
|||| || | | ||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 350228 CTCCCCGACGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCACTA 350169
Query 57067 TACTACCGAGGAT 57079
||||| |||||||
Sbjct 350168 TACTATCGAGGAT 350156
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543164141713440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |