Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq7154 102 6e-17 >seq7154 Length=3059319 Score = 102 bits (112), Expect = 6e-17 Identities = 104/135 (77%), Gaps = 8/135 (6%) Strand=Plus/Plus Query 118179 CCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGTCCAGTGATTTGGGCATACTG 118238 || || ||||| || | ||| ||||||||||||||| || | |||||| |||| | Sbjct 1909205 CCATCACGACCCGCTCGTCCAGCCTCTTGATAATAACCTTCAATTGATTTTGGCA----G 1909260 Query 118239 TG----ATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCATCCCGAACGCTATCGT 118294 || ||| | ||| || ||||| || || |||||||||||||| ||||| |||||||| Sbjct 1909261 TGAAAAATGCAGCACAAAACGCACATCTGGCTTATCGATGCCCATGCCGAATGCTATCGT 1909320 Query 118295 CGAACATATCACTCG 118309 || ||||||||| || Sbjct 1909321 CGCACATATCACGCG 1909335 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381739457633904