Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_011588.1 Length=127615 Score E Sequences producing significant alignments: (Bits) Value seq6862 82.4 6e-11 >seq6862 Length=220483 Score = 82.4 bits (90), Expect = 6e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 69589 AGACCATTTATTCGAGAGTCGCTCGTGTCTGCAAAAATGATCACGGCGGCCCACATCGGT 69648 |||| ||||| || ||||| ||||| || ||||| || |||| || || || || Sbjct 85734 AGACAATTTACTCAAGAGTTGCTCGCGTATGCAAGAACGATCGTGGGGGTCCGTATTCAC 85793 Query 69649 ACTCGGATAAATGGACGTCATTTTTAAAGACTCGACTAAATTGTTCGGTGCCCGGCGAAT 69708 ||| | | ||||| |||||||| || | || |||||||| || || |||||||||| Sbjct 85794 TCTCCAAAAGTTGGACTTCATTTTTGAAAGCGCGGCTAAATTGCTCTGTACCCGGCGAAT 85853 Query 69709 TCCCCTTTTACTTTGACGAA 69728 | || || ||||| || ||| Sbjct 85854 TTCCTTTCTACTTCGATGAA 85873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408207545824976