Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq7164 113 6e-20
>seq7164
Length=6205789
Score = 113 bits (124), Expect = 6e-20
Identities = 246/363 (68%), Gaps = 8/363 (2%)
Strand=Plus/Plus
Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805
|||||||||||||||| || | || ||||| | ||||||||| | |||| |||||
Sbjct 6011364 AACCTGTGCCAATACCATCAGCACCATTCACCAAAACCATTGGTATAATTGGTATATACC 6011423
Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865
| | |||||||||| | |||||||| | || | | || || || || |
Sbjct 6011424 ATTGTGGTTCAATCTTTTGACCATCATCAACTTCGTACGTCAACAATGGATCGTCGGCTG 6011483
Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTT--GTGAAGATGTACCT--CGTTTGA 175921
| | || || || | || ||||| || ||||| || || | || | |
Sbjct 6011484 GGTGGAATATGAGTCGCG--TCAACGGTGACATTAAGGTGAAAATATAACGAGCGCTCGC 6011541
Query 175922 GACGCATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTG 175981
|| |||||| |||||| ||||| || || |||||||||| ||||| | | |||
Sbjct 6011542 -ACA-ATCTTTACCACCCTGCAGACGTGTACCGAATTGACCACGGGGCTCCAATAAATTA 6011599
Query 175982 ATATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACT 176041
||||| ||||| |||| || | | |||||| ||||| || ||| || || || |
Sbjct 6011600 ATATTATTTGATCCCACGTAATTTTGCGCCAAATTGACTATGGTAGCCTGCAGTGACATC 6011659
Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101
||||||||||||||||| ||| | || ||||| | | | ||| ||||| || |||| |
Sbjct 6011660 TCACCGTGATGGTAGGCGGACATTTCAGCCACTGAACCAGACAATTGCGCAACTTTCACC 6011719
Query 176102 TCA 176104
|||
Sbjct 6011720 TCA 6011722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613452245092560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |