Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03]
7,166 sequences; 414,984,608 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq7084 113 7e-20
>seq7084
Length=1258986
Score = 113 bits (124), Expect = 7e-20
Identities = 320/489 (65%), Gaps = 2/489 (0%)
Strand=Plus/Plus
Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899
|| ||||| || || || || || || | || || | | | || ||| ||||||||
Sbjct 1541 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 1600
Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959
||||| || || || ||| ||||| | || || |||| || |||| ||||||
Sbjct 1601 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGC 1660
Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019
|| |||| ||| ||||| | ||||| || || |||||||| | | |||||||| |||
Sbjct 1661 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCC 1720
Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079
|| || || ||| ||| ||||||||||| || || ||| | | || | ||||
Sbjct 1721 ATTTTAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 1780
Query 204080 TGAGGCACATCTTC-CCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138
|| || | ||| | || | || |||||| || || | | | || |
Sbjct 1781 TGTGGTATGGATTCAATATGTTGT-ATGGAGCCGCGACTGGTTATAATATTATTTTTCAT 1839
Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198
|| || |||||| |||||| | | || || || | || ||| | || | | ||
Sbjct 1840 ATCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTG 1899
Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258
||| || || || ||||| | || || | | || ||| | ||||| || | |||
Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959
Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318
|||||||| | ||| ||||| || || || |||||||| || || |||| |||||
Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019
Query 204319 GCGCACACC 204327
||| | |||
Sbjct 2020 GCGGATACC 2028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795083973972960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |