Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20dorsalis_20[refseq_20GCF_5F000789215.1_202014-12-03] 7,166 sequences; 414,984,608 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq7084 113 7e-20 >seq7084 Length=1258986 Score = 113 bits (124), Expect = 7e-20 Identities = 320/489 (65%), Gaps = 2/489 (0%) Strand=Plus/Plus Query 203840 TTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCG 203899 || ||||| || || || || || || | || || | | | || ||| |||||||| Sbjct 1541 TTATCCACAGTAAATTGTATAGCATTTGCAGCTGGTTTCGTACGCAAATAATACATGCCC 1600 Query 203900 GTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGG 203959 ||||| || || || ||| ||||| | || || |||| || |||| |||||| Sbjct 1601 GTCTTGAGACCTGCCTTCCAGCCGTAGAAATGTATAGAAGTAAGCTTGCCATAGTTGGGC 1660 Query 203960 TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCC 204019 || |||| ||| ||||| | ||||| || || |||||||| | | |||||||| ||| Sbjct 1661 TCAGCCACGTGTATGTTGAACGACTGACTCTGATCGATGAATGCACCGCGATCTGCAGCC 1720 Query 204020 ATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGT 204079 || || || ||| ||| ||||||||||| || || ||| | | || | |||| Sbjct 1721 ATTTTAATCGAGGTTTTCACGGAAATCTCCCAAACAGTTTTGTATAGATCGCGTATGTGC 1780 Query 204080 TGAGGCACATCTTC-CCACGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGT 204138 || || | ||| | || | || |||||| || || | | | || | Sbjct 1781 TGTGGTATGGATTCAATATGTTGT-ATGGAGCCGCGACTGGTTATAATATTATTTTTCAT 1839 Query 204139 CTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTG 204198 || || |||||| |||||| | | || || || | || ||| | || | | || Sbjct 1840 ATCATCATCCCACAAACCCAACTCGGTTAGATCGCGTAACAAGTGATGATTTACAACTTG 1899 Query 204199 AAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTC 204258 ||| || || || ||||| | || || | | || ||| | ||||| || | ||| Sbjct 1900 AAATTCACCCGAAAGCACACGACGTGTATAAATATTAGAAGTGTACGGTTCAAATGACTC 1959 Query 204259 GTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTT 204318 |||||||| | ||| ||||| || || || |||||||| || || |||| ||||| Sbjct 1960 ATTGTTGCCCATAATTTGAGCAGTTGAAGCAGTTGGCATGGGCGCAAGCAGCAAAGAGTT 2019 Query 204319 GCGCACACC 204327 ||| | ||| Sbjct 2020 GCGGATACC 2028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795083973972960